Return to main results Retrieve Phyre Job Id

Job DescriptionP77580
Confidence97.52%DateThu Jan 5 12:30:45 GMT 2012
Rank106Aligned Residues91
% Identity20%Templatec2ixaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: a-zyme, n-acetylgalactosaminidase
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.. .......60.........70...
Predicted Secondary structure 














.........









Query SS confidence 

















































. . . . . . . . .




















Query Sequence  KRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGV. . . . . . . . . ATTHEGVIGLMNMPEFADIDI
Query Conservation 
  






 





 

 
 
  
   
 


   
 

 

  


......... 

  



 
   

  


Alig confidence 





















.

















.







.........














...


Template Conservation 







 
  
         .     



 
    
  .                      
  


    ...


Template Sequence  KVRIAFIAVGLRGQTHVENMAR. RDDVEIVAFADPDPYMVG. RAQEILKKNGKKPAKVFGNGNDDYKNMLKDKN. . . IDA
Template Known Secondary structure 


ST.
TT
S
.TT




SSTTTTT
TT...

Template Predicted Secondary structure 



.






.

















...

Template SS confidence 















































































   20.........30.........40. ........50......... 60.........70.........80.........90. ...
 
   74.....80.........90.........100
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  VFDATSAGAHVKNDAALREAKPDIRLI
Query Conservation 






 

  
   
  
  

  
Alig confidence 



















..




Template Conservation 
 
 

   
      

 
..



 
Template Sequence  VFVSSPWEWHHEHGVAAMKA. . GKIVG
Template Known Secondary structure 


GGGT..T
Template Predicted Secondary structure 






..


Template SS confidence 


























   95....100.........110.... .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions