Job Description P77580 Confidence 97.38% Date Thu Jan 5 12:30:45 GMT 2012 Rank 112 Aligned Residues 97 % Identity 23% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	I	D	I	V	F	D	A	T	S	A	G
Query Conservation
Alig confidence																									.																			.														.							.	.		.	.
Template Conservation																									.																			.														.							.	.		.	.
Template Sequence		R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	.	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	.	R	P	V	R	G	G	V	I	E	H	V	D	L	.	L	P	Q	R	V	P	.	.	G	.	.	R	I	E	I	A	L	L	T	V	P	R	E
Template Known Secondary structure		S										S										S			.		S	S									S		T	T	T	T	T	.				T	T						G	G	G	.					S	T	.	.	T	.	.	T								S
Template Predicted Secondary structure																									.																			.														.							.	.		.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.			.			140	.	.	.	.	.	.	.	.	.	150	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	.	D	L	T	P	A	A	I
Query Conservation																					.
Alig confidence														.	.						.
Template Conservation														.	.
Template Sequence		A	A	Q	K	A	A	D	L	L	V	A	A	.	.	G	I	K	G	I	L	N	F	A	P	V	V	L
Template Known Secondary structure														.	.	T								S	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions