Job Description P77580 Confidence 99.37% Date Thu Jan 5 12:30:45 GMT 2012 Rank 9 Aligned Residues 222 % Identity 21% Template c2czcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 pyrococcus horikoshii ot3 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.
Predicted Secondary structure																																																					.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.															.	.	.	.	.	.	.	.	.
Query Sequence		K	R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	.	.	T	T	H	E	G	V	I	G	L	M	N	M	P	E	.	.	.	.	.	.	.	.	.	F	A	D	I
Query Conservation																																																					.	.															.	.	.	.	.	.	.	.	.
Alig confidence																								.																													.	.															.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		K	V	K	V	G	V	N	G	Y	G	T	I	G	K	R	V	A	Y	A	V	T	K	.	Q	D	D	M	E	L	I	G	I	T	K	T	K	P	D	F	E	A	Y	R	A	K	E	L	G	I	P	V	Y	A	A	S	E	E	F	I	P	R	F	E	K	E	G	F	E	V	A	G	T	L	N	D	L	L	E	K	V
Template Known Secondary structure											S												T	.		S	S									S	S											T	T						S	S	G	G	G							T	T				S		B						T	T
Template Predicted Secondary structure																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	A	A	I	.	.	.	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	V	N	M	V	T	C	G	G	Q	A	T	I	P	M	V	A	A	V	S	R	V	A	R
Query Conservation																																						.	.	.
Alig confidence																								.	.													.	.	.
Template Conservation																								.	.
Template Sequence		D	I	I	V	D	A	T	P	G	G	I	G	A	K	N	K	P	L	Y	E	K	A	.	.	G	V	K	A	I	F	Q	G	G	E	K	A	D	V	A	E	V	S	F	V	A	Q	A	N	Y	E	A	A	L	G	K	N	Y	V	R	V	V	S	C	N	T	T	G	L	V	R	T	L	S	A	I	R	E	Y	A	D
Template Known Secondary structure		S							S	T	T												T	.	.	T							T	T	S		G	G	G	S	S									G	G	G	G	T	T		S																				G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure													.																																																								.
Query SS confidence													.																																																								.
Query Sequence		V	H	Y	A	E	I	I	A	S	I	A	.	S	K	S	A	G	P	G	T	R	A	N	I	D	E	F	T	E	T	T	S	R	A	I	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P	A	E	P	P	L	M	M	R	D	T	V	Y	V	L	S	.	D	E	A	S	Q	D	D	I	E	A	S	I
Query Conservation													.																																																								.
Alig confidence													.																																																								.
Template Conservation
Template Sequence		Y	V	Y	A	V	M	I	R	R	A	A	D	P	N	D	T	K	R	G	P	I	N	A	I	K	P	T	V	E	V	P	S	H	H	G	P	D	V	Q	T	V	I	P	I	N	I	E	T	M	A	F	V	V	P	T	T	L	M	H	V	H	S	V	M	V	E	L	K	K	P	L	T	K	D	D	V	I	D	I	F
Template Known Secondary structure											S	S		T	T			S				S	S							S	S	S		T						T	T	T	S												S			S											S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		227
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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