Job Description P77580 Confidence 99.05% Date Thu Jan 5 12:30:45 GMT 2012 Rank 15 Aligned Residues 222 % Identity 16% Template c1ys4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: structure of aspartate-semialdehyde dehydrogenase from2 methanococcus jannaschii Resolution 2.29 Å

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		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.
Predicted Secondary structure										.																																																						.	.	.	.	.	.	.	.	.
Query SS confidence										.																																																						.	.	.	.	.	.	.	.	.
Query Sequence		K	R	K	V	A	I	I	G	.	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	.	.	.	.	.	.	.	.	.	N	M	P	E	F	A	D	I	D
Query Conservation										.																																																						.	.	.	.	.	.	.	.	.
Alig confidence										.															.														.																									.	.	.	.	.	.	.	.	.
Template Conservation																									.														.
Template Sequence		K	I	K	V	G	V	L	G	A	T	G	S	V	G	Q	R	F	V	Q	L	L	A	D	.	H	P	X	F	E	L	T	A	L	A	A	S	E	.	R	S	A	G	K	K	Y	K	D	A	C	Y	W	F	Q	D	R	D	I	P	E	N	I	K	D	X	V	V	I	P	T	D	P	K	H	E	E	F	E	D	V	D
Template Known Secondary structure									T	T	T	S											T	T	.		S	S										T	.	T	T	T	T	S	B					S					S	S								T		B				S		T	T	S	G	G	G	T	T
Template Predicted Secondary structure																									.														.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.														.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	A	I	G	P	.	.	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	V	N	M	V	T	C	G	G	Q	A	T	I
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence																							.	.									.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																							.	.
Template Sequence		I	V	F	S	A	L	P	S	D	L	A	K	K	F	E	P	E	F	A	K	E	.	.	G	K	L	I	F	S	N	A	S	A	Y	R	X	E	E	D	V	P	L	V	I	P	E	V	N	A	D	H	L	E	L	I	E	I	Q	R	E	K	R	G	W	D	G	A	I	I	T	N	P	N	C	S	T	I	C	A	V
Template Known Secondary structure																						T	.	.	T								S	T	T	T	T		T	T	S		B							G	G	G	G	G												S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.														.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I	I	A	S	I	A	S	K	S	A	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	N	I	D	E	F	T	E	T	T	S	R	A	I	.	.	.	.	.	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	K	P	I	X	D	K	F	G	L	E	A	V	F	I	A	T	X	Q	A	V	S	G	A	G	Y	N	G	V	P	S	X	A	I	L	D	N	L	I	P	F	I	K	N	E	E	E	K	X	Q	T	E	S	L	K	L	L	G	T	L	K	D	G	K	V	E	L	A	N	F	K	I	S	A	S	C	N	R
Template Known Secondary structure														S								B		S	G	G	G		T	T	T	S						T	T			B	S			T	T													T	S				T	T															B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	E	P	P	L	M	M	R	D	T	V	Y	V	L	S	.	D	E	A	S	Q	D	D	I	E	A	S	I	N	E
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		V	A	V	I	D	G	H	T	E	S	I	F	V	K	T	K	E	G	A	E	P	E	E	I	K	E	V	X	D	K
Template Known Secondary structure			S		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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