Job Description P77580 Confidence 80.34% Date Thu Jan 5 12:30:45 GMT 2012 Rank 350 Aligned Residues 129 % Identity 23% Template c1pgjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei Resolution 2.82 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		D	V	G	V	V	G	L	G	V	M	G	A	N	L	A	L	N	I	A	E	K	G	F	K	V	.	.	.	.	.	A	V	F	N	R	T	Y	S	K	S	E	E	F	M	K	A	N	A	S	A	P	F	A	G	N	L	K	A	F	E	T	M	E	A	F	A	A	S	L	K	K	P	R	K	A	L	I	L	V	Q
Template Known Secondary structure		S							S													T	T				.	.	.	.	.					S	S											T	T	T	S	T	T	G	G	G					S									B		S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
				53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	A	A	I	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	V	N	M	V	T
Query Conservation		.	.
Alig confidence		.	.																.	.																																	.	.	.	.	.	.	.	.	.	.														.				.
Template Conservation																			.	.																																	.	.	.	.	.	.	.	.	.	.														.				.
Template Sequence		A	G	A	A	T	D	S	T	I	E	Q	L	K	K	V	F	E	.	.	K	G	D	I	L	V	D	T	G	N	A	H	F	K	D	Q	G	R	R	A	Q	Q	L	E	A	A	G	L	R	F	L	G	.	.	.	.	.	.	.	.	.	.	M	G	I	S	G	G	E	E	G	A	R	K	G	.	P	A	F	.	F
Template Known Secondary structure			S																.	.	T	T																							T	T	T						.	.	.	.	.	.	.	.	.	.					S									.				.
Template Predicted Secondary structure																			.	.																																	.	.	.	.	.	.	.	.	.	.														.				.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.		.
		131	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.						.	150	.	.
Predicted Secondary structure									.	.	.	.	.												.	.	.	.	.
Query SS confidence									.	.	.	.	.												.	.	.	.	.
Query Sequence		C	G	G	Q	A	T	I	.	.	.	.	.	P	M	V	A	A	V	S	R	V	A	R	.	.	.	.	.	V	H	Y	A
Query Conservation									.	.	.	.	.												.	.	.	.	.
Alig confidence									.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		P	G	G	T	L	S	V	W	E	E	I	R	P	I	V	E	A	A	A	A	K	A	D	D	G	R	P	C	V	T	M	N
Template Known Secondary structure																				S		B		T	T	S		B	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions