Job Description P77580 Confidence 97.79% Date Thu Jan 5 12:30:45 GMT 2012 Rank 81 Aligned Residues 244 % Identity 16% Template c1obfO_ PDB info PDB header:glycolytic pathway Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: the crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from alcaligenes xylosoxidans at 1.73 resolution. Resolution 1.7 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		I	R	V	A	I	N	G	Y	G	R	I	G	R	N	I	L	R	A	H	Y	E	G	G	K	S	H	D	I	E	I	V	A	I	N	D	L	.	G	D	P	K	T	N	A	H	L	T	R	Y	D	T	A	H	G	K	F	P	G	T	V	S	V	N	G	S	Y	M	V	V	N	G	D	K	I	R	V	D	A	N	R
Template Known Secondary structure										S													T	T	S		S	S									S	.	S													T	T	T				S	S						T	T					T	T									S
Template Predicted Secondary structure																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																			.					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																			.					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	.	P	A	A	I	.	.	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	V	N	M	V	T	C	G	G	Q	A	T
Query Conservation		.	.	.	.	.	.	.	.	.	.																																			.					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.									.					.	.
Template Conservation																																				.	.
Template Sequence		N	P	A	Q	L	P	W	G	A	L	K	V	D	V	V	L	E	C	T	G	F	F	T	T	K	E	K	A	G	A	H	I	K	G	.	.	G	A	K	K	V	I	I	S	A	P	G	G	A	D	V	D	A	T	V	V	Y	G	V	N	H	G	T	L	K	S	T	D	T	V	I	S	N	A	S	T	T	N	C	L
Template Known Secondary structure			G	G	G	S		T	T	T	T	T		S						S	S	S			S											.	.	T		S					S	S				T	T	S	S					T	T	T	S	G	G	G			T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I	I	A	S	I	A	S	K	S	A	G	P	G	T	R	A	N	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	E	T	T	S	R	A	I	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	P	L	V	K	P	L	N	D	K	L	G	L	Q	D	G	L	M	T	T	V	H	A	Y	T	N	N	Q	V	L	T	D	V	Y	H	E	D	L	R	R	A	R	S	A	T	M	S	M	I	P	T	K	T	G	A	A	A	A	V	G	D	V	L	P	E	L	D	G	K	L	N	G	Y	A	I	R	V	.	.	.
Template Known Secondary structure												T															T	T	S		S	S					S	S	T	T	T	T	S		T	T	T																		G	G	G	T	T	S									.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	P	L	M	M	R	D	T	V	Y	V	L	S	D	E	A	S	Q	D	D	I	E	A	S	I	N	E	M	A	E	A	V	Q	A	Y	V	P	G	Y	R	L	K	Q	R	V	Q	F	E	V	I	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	I	N	V	S	I	V	D	L	S	F	V	A	K	R	N	T	T	V	E	E	V	N	G	I	L	K	A	A	S	E	G	E	L	K	G	I	L	D	Y	N	T	E	P	L	V	S	V	D	Y	N	H	D
Template Known Secondary structure		S		S	S											S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions