Return to main results Retrieve Phyre Job Id

Job DescriptionP77580
Confidence87.73%DateThu Jan 5 12:30:45 GMT 2012
Rank290Aligned Residues86
% Identity19%Templatec1j4aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70........
Predicted Secondary structure 




























..
Query SS confidence 













































































. .
Query Sequence  MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVIGLMNMPEFADIDIVFDAT. .
Query Conservation    
  






 





 

 
 
  
   
 


   
 

 

  


 

  



 
   

  







..
Alig confidence 





















...
















....









..





.....








..
Template Conservation 
 

 




 
 

  

  
...  

  
   
      ....          ..
 


 ..... 



    

Template Sequence  VRDQVVGVVGTGHIGQVFMQIM. . . EGFGAKVITYDIFRNPE. . . . LEKKGYYVDS. . LDDLYK. . . . . QADVISLHVPD
Template Known Secondary structure  GGGS

S...TT

SS

....TT
B
S
.......
S
S

Template Predicted Secondary structure 






...







....




.......




Template SS confidence 















































































   144.....150.........160..... ....170.........180.. .......190.. ...... .200.........
 
   7980.........90.........100
Predicted Secondary structure  .




Query SS confidence  .





















Query Sequence  . SAGAHVKNDAALREAKPDIRLI
Query Conservation  .

 

  
   
  
  

  
Alig confidence  .





















Template Conservation 
  
  

    
  

 

 

Template Sequence  VPANVHMINDESIAKMKQDVVIV
Template Known Secondary structure 
GGGTT
BSS
TT
Template Predicted Secondary structure 













Template SS confidence 






















   210.........220.........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions