Job Description P77580 Confidence 98.04% Date Thu Jan 5 12:30:45 GMT 2012 Rank 61 Aligned Residues 142 % Identity 18% Template c1ihxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of two d-glyceraldehyde-3-phosphate2 dehydrogenase complexes: a case of asymmetry Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.												.																	.	.																						.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.												.																	.	.																						.	.
Template Sequence		K	I	G	I	N	G	F	G	R	I	G	.	R	L	V	L	R	T	A	L	E	M	G	.	A	Q	V	V	A	V	N	D	P	F	I	A	L	E	Y	M	.	.	V	Y	M	F	K	Y	D	S	T	H	G	M	F	K	G	E	V	K	V	E	D	.	.	G	A	L	V	V	D	G	K	K	I	T	V	F	N	E
Template Known Secondary structure									S				.								T	T	T	T	.									T	T	S						.	.								T	T	T					S						S	.	.	S					T	T
Template Predicted Secondary structure													.												.																	.	.																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
														71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																			.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																			.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	.	A	A	I	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	.	V	N	M	V	T	C	G	G	Q	A	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																			.																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.													.																						.
Template Conservation																																		.	.
Template Sequence		M	K	P	E	N	I	P	W	S	K	A	G	A	E	Y	I	V	E	S	T	G	V	F	T	T	I	E	K	A	S	A	H	.	.	F	K	G	G	A	K	K	V	I	I	S	A	P	S	A	D	A	P	M	F	V	C	G	V	N	L	E	K	Y	S	K	D	M	K	V	V	S	N	A	S	C	T	T	N	C	L
Template Known Secondary structure		S	S	G	G	G							T								S	S	S			S					G	G	G	.	.	G	T	T	T		S					S	S			S	S	S		B			T	T	T	S	G	G	G			T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	V	A	K	V	L	H	E	N	F	E	I	V	E	G	L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions