Job Description P77580 Confidence 98.08% Date Thu Jan 5 12:30:45 GMT 2012 Rank 57 Aligned Residues 264 % Identity 18% Template c1cerC_ PDB info PDB header:oxidoreductase (aldehyde(d)-nad(a)) Chain: C: PDB Molecule:holo-d-glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: determinants of enzyme thermostability observed in the2 molecular structure of thermus aquaticus d-glyceraldehyde-3 3-phosphate dehydrogenase at 2.5 angstroms resolution Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.			.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.			.	.	.	.
Template Sequence		M	K	V	G	I	N	G	F	G	R	I	G	R	Q	V	F	R	I	L	H	S	.	R	G	.	.	.	.	V	E	V	A	L	I	N	D	L	T	D	N	K	T	L	A	H	L	L	K	Y	D	S	I	Y	H	R	F	P	G	E	V	A	Y	D	D	Q	Y	L	Y	V	D	G	K	A	I	R	A	T	A	V	K
Template Known Secondary structure										S													.	T	T	.	.	.	.									S	S													T	T	T		S		S	S						S	S					T	T									S
Template Predicted Secondary structure																							.			.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																								.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	A	A	I	G	.	.	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	.	.	L	N	V	N	M	V	T	C	G	G	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.																																								.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.														.	.																.	.
Template Conservation																																				.	.
Template Sequence		D	P	K	E	I	P	W	A	E	A	G	V	G	V	V	I	E	S	T	G	V	F	T	D	A	D	K	A	K	A	H	L	E	G	.	.	G	A	K	K	V	I	I	T	A	P	A	K	G	E	D	I	T	I	V	M	G	V	N	H	E	A	Y	D	P	S	R	H	H	I	I	S	N	A	S	C	T	T	N	S
Template Known Secondary structure			G	G	G	S						T								S	S	S			B					G	G	G	G	G	G	.	.	T		S					S	S			B	S		S					T	T	T	S	G	G	G			T	T	T									T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I	I	A	S	I	A	S	K	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	R	A	N	I	D	E	F	T	E	T	T	S	R	A	I	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P	A	E	P
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	P	V	M	K	V	L	E	E	A	F	G	V	E	K	A	L	M	T	T	V	H	S	Y	T	N	D	Q	R	L	L	D	L	P	H	K	D	L	R	R	A	R	A	A	A	I	N	I	I	P	T	T	T	G	A	A	K	A	T	A	L	V	L	P	S	L	K	G	R	F	D	G	M	A	L	R	V	P	T
Template Known Secondary structure													T															T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G																		G	G	G	T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure														.																																									.
Query SS confidence														.																																									.
Query Sequence		P	L	M	M	R	D	T	V	Y	V	L	S	.	D	E	A	S	Q	D	D	I	E	A	S	I	N	E	M	A	E	A	V	Q	A	Y	V	P	G	Y	R	L	K	Q	R	V	Q	F	E	V	I	P	Q	D	.	K	P	V	N	L	P	G	V	G	Q	F	S	G	L	K	T	A	V	W	L
Query Conservation														.																																									.
Alig confidence														.																																									.
Template Conservation
Template Sequence		A	T	G	S	I	S	D	I	T	A	L	L	K	R	E	V	T	A	E	E	V	N	A	A	L	K	A	A	A	E	G	P	L	K	G	I	L	A	Y	T	E	D	E	I	V	L	Q	D	I	V	M	D	P	H	S	S	I	V	D	A	K	L	T	K	A	L	G	N	M	V	K	V	F	A
Template Known Secondary structure		S	S											S	S																	T	T	T	B	T	T						S				G	G	G	S	T	T				S					G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions