Job Description P08555 Confidence 1.40% Date Thu Jan 5 11:01:32 GMT 2012 Rank 59 Aligned Residues 129 % Identity 9% Template c2ksaA_ PDB info PDB header:neuropeptide receptor/neuropeptide Chain: A: PDB Molecule:substance-p receptor; PDBTitle: substance p in dmpc/chaps isotropic q=0.25 bicelles as a ligand for2 nk1r Resolution UNK

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	I	G	S	V	I	V	Y	G	L	L	V	G	L	M	A	S	L	I	G	G	P	L	F	L	K	F	L	G	Q	R	L	P	F	K	P	V	P	T	E	F	A	D	L	K	V	R	D	E	K	T	L	P	S	L	G	A	T	L	F	T	I	L	L	P	I	A	L	M	L	V	K	T	I	A	E	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	Y	E	K	V	Y	H	I	C	V	T	V	L	I	Y	F	L	P	L	L	V	I	G	Y	A	Y	T	V	V	G	I	T	L	W	A	S	E	I	P	G	D	S	S	D	R	Y	H	E	Q	V	S	A	K	R	K	V	V	K	M	M	I	V	V	V	C	T	F	A	I	C	W	L	P	F	H	I	F	F	L
Template Known Secondary structure		T	T	T													T																	S	S		S				S	S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	R	E	S	G	L	Y	I	L	V	E	F	I	G	N	P	I	T	A	M	F	I	A	V	F	V	A	Y	Y	V	L	G	I	R	Q	H	M	S	M	G	T	M	L	T	H	T	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	Y	I	N	P	D	L	Y	L	K	K	F	I	Q	Q	V	Y	L	A	I	M	W	L	A	M	S	S	T	M	Y	N	P	I	I	Y	C	C	L	N	D	R	F	R	L	G	F	K	H
Template Known Secondary structure						S	T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions