Job Description P08555 Confidence 4.66% Date Thu Jan 5 11:01:32 GMT 2012 Rank 7 Aligned Residues 67 % Identity 7% Template c2k21A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c Resolution UNK

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	I	G	S	V	I	V	Y	G	L	L	V	G	L	M	A	S	L	I	G	G	P	L	F	L	K	F	L	G	Q	R	L	P	F	K	P	V	P	T	E	F	A	D	L	K	V	R	D	E	K	T	L	P	S	L	G	A	T	L	F	T	I	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	G	K	L	E	A	L	Y	V	L	M	V	L	G	F	F	G	F	F	T	L	G	I	M	L	S	Y	I	R	S	K	K	L	E	H	S	N	D	P	F	N	V	Y	I	E	S	D	A	W	Q	E	K	D	K	A	Y	V	Q	A	R	V	L	E	S	Y	K
Template Known Secondary structure		T	T		S	S	T	T																																	T	T	T	T	T	S		T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions