Return to main results Retrieve Phyre Job Id

Job DescriptionP08555
Confidence1.24%DateThu Jan 5 11:01:32 GMT 2012
Rank78Aligned Residues43
% Identity7%Templatec1c9bI_
PDB info PDB header:transcription/dnaChain: I: PDB Molecule:general transcription factor iib; PDBTitle: crystal structure of a human tbp core domain-human tfiib2 core domain complex bound to an extended, modified3 adenoviral major late promoter (admlp)
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   381........390.........400.........410.........420...
Predicted Secondary structure 









Query SS confidence 










































Query Sequence  ISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYY
Query Conservation          
   
                   
       
  
Alig confidence 










































Template Conservation 
  





 

            

    

  

    
 
Template Sequence  PISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLI
Template Known Secondary structure  SSS


T

Template Predicted Secondary structure 







Template SS confidence 










































   250.........260.........270.........280.........290..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions