Job Description P0AA84 Confidence 90.57% Date Thu Jan 5 11:12:11 GMT 2012 Rank 18 Aligned Residues 95 % Identity 12% Template d1qzqa1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		E	R	I	I	L	E	T	F	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	.	.	.	R	G	V	K	A	E	V	L	L	D	G	Y	G	S	P	D	L	S	D	E	F	V	N	E	L	T	A	A	G	V	V	F	R	Y	Y	D	P	R	P	R	L	F	G	M	R	T	N	V	F
Query Conservation																														.	.	.
Alig confidence													.	.	.	.	.	.	.	.										.	.	.												.	.																																.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																								.	.																																.	.	.	.	.
Template Sequence		V	S	S	A	Q	F	N	Y	C	F	D	.	.	.	.	.	.	.	.	V	D	W	L	V	K	Q	Y	P	P	E	F	R	K	K	P	I	L	L	V	H	G	D	.	.	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	N	I	S	L	C	Q	A	K	L	D	I	A	F	G	T	.	.	.	.	.
Template Known Secondary structure									S		B		.	.	.	.	.	.	.	.								S		G	G	G	T	T	S									.	.													T	T		T	T										S	T	T			.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																								.	.																																.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		R	R	M	H	R	K	I	V	V	I	.	.	.	D	A	R	I	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K
Query Conservation												.	.	.
Alig confidence		.	.									.	.	.
Template Conservation		.	.
Template Sequence		.	.	H	H	T	K	M	M	L	L	L	Y	E	E	G	L	R	V	V	I	H	T	S	N	L	I	H	A	D	W	H	Q	K	T	Q	G	I	W
Template Known Secondary structure		.	.											S	S											B	S	G	G	G	G	T	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions