Job Description P0AA84 Confidence 66.48% Date Thu Jan 5 11:12:11 GMT 2012 Rank 22 Aligned Residues 112 % Identity 10% Template d1q32a1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 2.03

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		107	.	.	110	.	.	.	.	.	.	.	.	.				120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure															.	.	.			.																									.
Query SS confidence															.	.	.			.																									.
Query Sequence		N	V	F	R	R	M	H	R	K	I	V	V	I	.	.	.	D	A	.	R	I	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K	Q	.	D	Y	A	V	R	L	E	G	P	I	V	E	D	I	L	Q	F	E	L	E	N	L	P	G	Q	S	A	A	R	R	W	W	R	R	H	H
Query Conservation															.	.	.			.																									.
Alig confidence															.	.	.			.																									.
Template Conservation
Template Sequence		P	P	F	A	S	H	H	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P	S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I	T	K
Template Known Secondary structure			T	T													S	T	T								S	S		B	S						S	S																S	S														T	T									T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	E	N	R	Q	P	G	E	A	Q	V	L	L	V	W	R	D	N	E	E	H	R	D	D	I	E	R	H	Y	L	K	M	L	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K
Template Known Secondary structure					T				G	G	G	T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions