Job Description P0AA84 Confidence 98.10% Date Thu Jan 5 11:12:11 GMT 2012 Rank 13 Aligned Residues 219 % Identity 13% Template c3sq3C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna phosphodiesterase2 h182a mutant Resolution 2.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.			.																									.
Query SS confidence																	.	.	.			.																									.
Query Sequence		R	T	N	V	F	R	R	M	H	R	K	I	V	V	I	.	.	.	D	A	.	R	I	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K	Q	.	D	Y	A	V	R	L	E	G	P	I	V	E	D	I	L	Q	F	E	L	E	N	L	P	G	Q	S	A	A	R	R	W	W	R	R
Query Conservation																	.	.	.			.																									.
Alig confidence																	.	.	.			.																									.
Template Conservation
Template Sequence		T	M	P	P	F	A	S	H	A	T	K	L	I	I	N	F	Y	D	N	G	E	C	K	I	F	L	P	S	N	N	F	T	S	M	E	T	N	L	P	Q	Q	V	C	W	C	S	P	L	L	K	I	G	K	E	G	L	P	V	P	F	K	R	S	L	I	E	Y	L	N	S	Y	H	L	K	D	I	D	E	L	I
Template Known Secondary structure					T	T			B										T	T	S								S	S		B	S						S	S	B																S														T	T									T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	H	K	A	E	E	N	R	Q	P	G	E	A	Q	V	L	L	V	W	R	D	N	E	E	H	R	D	D	I	E	R	H	Y	L	K	M	L	T	Q	A	R	R	.	.	.	E	V	I	I	A	N	A	Y	F	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	S	V	E	E	V	N	F	A	P	L	S	E	L	E	F	V	Y	S	T	P	S	K	F	Q	S	S	G	L	L	S	F	Y	N	K	L	E	K	L	S	D	T	A	K	H	Y	L	C	Q	T	S	S	I	G	T	S	L	S	R	A	R	D	E	N	L	W	T	H	L	M	I	P	L	F	T	G	I	M	S
Template Known Secondary structure							T				G	G	G	T	T										S	S	S														T												S	B	B				S		S	S	S								T						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
				233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.														.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.									.	.	.	.	.
Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		.	.	G	Y	R	F	L	H	A	L	R	K	A	A	R	R	G	V	R	I	K	L	I	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	P	D	M	P	I	V	R	V	G	A	R	L	L	Y	N	Y	L	V	K	G	G	V	Q	V	F	E	Y	.	.	.	.	.	.	.	.	R	R	R	P	L
Query Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	I	L	P	T	N	S	L	I	N	E	Y	S	Q	R	K	I	K	P	Y	I	I	F	P	T	E	Q	E	F	V	T	S	P	L	K	W	S	S	S	G	W	F	H	F	Q	Y	L	Q	K	K	S	Y	Y	E	M	L	R	N	K	F	K	V	F	Y	K	Q	D	P	A	M	V	T	R	R	R	G	T	T	P
Template Known Secondary structure																		T									B						T	S	T	T	G	G	G	G	G	G	G		B				S	T	T										T	S								T	T	S	S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
			290	.	.	.	.	.			.	.	.	.								300	.	.	.	.	.	.	.	.	.	310	.	.	.							.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.							.	.					.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence		.							.	.					.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		.	H	G	K	V	A	L	.	.	M	D	D	H	.	.	.	.	.	.	.	W	A	T	V	G	S	S	N	L	D	P	L	S	L	.	.	.	.	.	.	S	L	N	L	E	A	N	V	I	I
Query Conservation		.							.	.					.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence		.							.	.					.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	S	K	F	Y	M	H	C	A	T	N	S	Q	V	F	K	E	L	E	W	C	L	Y	T	S	A	N	L	S	Q	T	A	W	G	T	V	S	R	K	P	R	N	Y	E	A	G	V	L	Y
Template Known Secondary structure		B														T	T	S			S						S			B	S							S	S	S				S	B
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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