Job Description P0AA84 Confidence 100.00% Date Thu Jan 5 11:12:11 GMT 2012 Rank 1 Aligned Residues 364 % Identity 15% Template c3hsiC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphatidylserine synthase; PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.						.
Predicted Secondary structure																																																																.	.											.	.	.	.	.
Query SS confidence																																																																.	.											.	.	.	.	.
Query Sequence		M	K	C	S	W	R	E	G	N	K	I	Q	L	L	E	N	G	E	Q	Y	Y	P	A	V	F	K	A	I	G	E	A	Q	E	R	I	I	L	E	T	F	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	R	G	.	.	V	K	A	E	V	L	L	D	G	Y	.	.	.	.	.	G
Query Conservation																																																																.	.											.	.	.	.	.
Alig confidence																																																																.	.											.	.	.	.	.
Template Conservation
Template Sequence		L	P	F	L	A	L	Q	A	E	Q	I	E	F	L	G	S	S	A	E	F	K	T	Q	I	I	E	L	I	R	N	A	K	K	R	I	Y	V	T	A	L	Y	W	Q	K	D	E	A	G	Q	E	I	L	D	E	I	Y	R	V	K	Q	E	N	P	H	L	D	V	K	V	L	I	D	W	H	R	A	Q	R	N	L
Template Known Secondary structure				B					G	G	G						S																S	S							S		B		S	S																		T	T									T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	D	L	S	D	E	F	V	N	E	L	T	A	A	G	V	V	F	R	Y	Y	D	P	R	P	R	L	F	G	M	R	T	N	V	F	R	R	M	H	R	K	I	V	V	I	D	A	R	I	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K	Q	D	Y	A	V	R	L	E	G
Query Conservation
Alig confidence																																																									.														.
Template Conservation																																																									.														.
Template Sequence		L	S	A	T	N	A	D	W	Y	C	E	Q	R	Q	T	Y	Q	L	P	D	D	P	N	X	F	F	G	V	P	I	N	T	R	E	V	F	G	V	L	H	V	K	G	F	V	F	D	D	T	V	L	Y	S	G	A	.	S	I	N	N	V	Y	L	H	Q	F	E	K	Y	.	R	Y	D	R	Y	Q	K	I	T	H
Template Known Secondary structure																				S	S										S	S	S	S	G	G	G											T	T						S		.		B	S	T	T	T	T	T		S	S			.
Template Predicted Secondary structure																																																									.														.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	V	E	D	I	L	Q	F	E	L	E	N	L	P	G	Q	S	A	A	R	R	W	W	R	R	H	H	K	A	E	E	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	G	E	A	Q	V	L	L	V	W	R	D	N	E	E	H	R	D	D	I	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	L	A	D	S	X	V	N	F	I	N	D	Y	L	L	D	F	S	A	V	Y	P	L	D	V	T	N	R	P	R	T	K	E	I	R	G	N	I	R	A	Y	R	K	D	L	A	Q	N	G	E	Y	S	L	K	S	A	V	K	L	P	N	V	L	S	V	S	P	L	F	G	L	G	A	S	G	N	E	L	N
Template Known Secondary structure															T	T			T	T	T				S	S	S	S					T	G	G	G																				S	S		B	S	S		S	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																								.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	Y	L	K	M	L	T	Q	A	R	R	E	V	I	I	A	N	A	Y	F	F	P	G	Y	R	F	L	H	A	L	R	K	A	A	R	R	G	V	R	I	K	L	I	I	Q	G	E	P	D	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	R	V	G
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	I	E	D	L	F	L	Q	V	Q	K	K	L	V	I	C	T	P	Y	F	N	F	P	R	T	L	Q	H	K	I	A	T	L	L	E	N	G	K	R	V	E	I	I	V	G	D	K	V	A	N	D	F	Y	I	P	P	E	Q	P	F	K	X	A	G	A	L	P	Y	L	Y	E	S	N	L	R	R	F	C	E
Template Known Secondary structure										T		S	S							S	S	S																T	T										G	G	G	S	T	T				T	T	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		A	R	L	L	Y	N	Y	L	V	K	G	G	V	Q	V	F	E	Y	R	R	R	P	L	H	G	K	V	A	L	M	D	D	H	W	A	T	V	G	S	S	N	L	D	P	L	S	L	S	L	N	L	E	A	N	V	I	I	H	D	.	.	R	H	F	N	Q	T	L	R	D	N	L	N	G	I	I	A	A	D	C
Query Conservation																																																													.	.
Alig confidence																																																													.	.																			.
Template Conservation																																																																																	.
Template Sequence		K	F	E	T	Q	I	E	S	G	Q	L	V	V	R	L	W	R	D	G	D	N	T	Y	H	L	K	G	V	W	V	D	D	R	Y	I	L	L	T	G	N	N	L	N	P	R	A	W	R	L	D	A	E	N	G	L	L	I	Y	D	P	Q	Q	Q	L	L	A	Q	V	E	K	E	Q	N	Q	I	R	Q	H	T	.
Template Known Secondary structure			T							T	S									T	T											T	T	T									S	S	T	T	T	T	T	T	S										T	T		T	T												G	G	G		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		345	.	.	.					.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.									.
Query SS confidence						.	.	.	.									.
Query Sequence		Q	Q	V	D	.	.	.	.	E	T	M	L	P	K	R	T	.	W	W	N	L	T	K	S	V	L	A	F
Query Conservation						.	.	.	.									.
Alig confidence						.	.	.	.									.
Template Conservation
Template Sequence		K	V	L	K	H	Y	T	E	L	E	E	L	N	Q	Y	P	E	P	V	Q	K	L	L	K	K	F	A	R
Template Known Secondary structure						S	G	G	G	S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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