Job Description P0AA84 Confidence 5.33% Date Thu Jan 5 11:12:11 GMT 2012 Rank 88 Aligned Residues 111 % Identity 13% Template c3brqA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator ascg; PDBTitle: crystal structure of the escherichia coli transcriptional repressor2 ascg Resolution 2.00 Å

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		9	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		N	K	I	Q	L	L	E	N	.	.	G	E	Q	Y	Y	P	A	V	F	K	A	I	G	E	A	Q	E	R	I	I	L	E	T	F	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	R	G	V	K	A	E	V	L	L	D	G	Y	G	S	P	D	L	S	D	E	F	V	N	E	L	T
Query Conservation										.	.
Alig confidence										.	.																																																								.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		Q	T	L	G	L	V	V	T	N	T	L	Y	H	Y	F	S	E	L	L	F	H	A	A	R	X	A	E	E	K	G	R	Q	L	L	L	A	D	G	K	H	S	A	E	E	E	R	Q	A	I	Q	Y	L	L	D	L	R	C	D	A	I	X	I	Y	P	R	.	.	.	F	L	S	V	D	E	I	D	D	I	I	D
Template Known Secondary structure										G	G	G																		T	T									T	T	S														T	T		S							S	.	.	.	S	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	G	V	V	F	R	Y	Y	D	P	R	P	R	L	F	G	M	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	F	R	R	M	H	R	K	I	V	V	I	D	A	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	S	Q	P	I	X	V	L	N	R	R	L	R	K	N	S	S	H	S	V	W	C	D	H	K	Q	T	S	F	N	A	V	A	E	L	I	N	A	G	H	Q	E	I	A	F	L	T	G	S
Template Known Secondary structure		T		S	S						S				S	S	S	G	G	G																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions