Job Description P0AA84 Confidence 99.89% Date Thu Jan 5 11:12:11 GMT 2012 Rank 7 Aligned Residues 281 % Identity 20% Template c2o8rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis Resolution 2.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		L	L	E	N	G	E	Q	Y	Y	P	A	V	F	K	A	I	G	E	A	Q	E	.	.	.	.	.	R	I	I	L	E	T	F	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	R	G	V	K	A	E	V	L	L	D	G	Y	G	S	P	D	L	S	D	E	F	V	N	E	L	T	A
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.													.	.	.																												.	.
Template Conservation																																								.	.	.																												.	.
Template Sequence		L	I	H	V	P	Y	Y	T	Y	D	Y	V	V	R	L	L	X	E	A	A	I	S	P	D	V	S	E	I	R	L	T	Q	Y	R	V	A	E	N	.	.	.	S	S	I	I	S	A	L	E	A	A	A	Q	S	G	K	K	V	S	V	F	V	E	L	K	A	R	F	.	.	N	L	R	L	S	E	R	X	R	R
Template Known Secondary structure						T	T	B		S												T		T	T									S				S		.	.	.													T	T											S			.	.
Template Predicted Secondary structure																																								.	.	.																												.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.				.	.	.																																	.
Query SS confidence																																		.	.	.	.	.	.				.	.	.																																	.
Query Sequence		A	G	V	V	F	R	Y	Y	D	P	R	P	R	L	F	G	M	R	T	N	V	F	R	R	M	H	R	K	I	V	V	I	.	.	.	.	.	.	D	A	R	.	.	.	I	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K	Q	D	Y	A	V	R	L	E	G	P	.	I	V	E
Query Conservation																																		.	.	.	.	.	.				.	.	.																																	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.				.	.	.										.	.	.	.	.																			.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		S	G	I	R	I	V	Y	S	X	P	G	L	K	V	.	.	.	.	.	.	.	.	.	.	.	H	A	K	T	A	L	I	L	Y	H	T	P	A	G	E	R	P	Q	G	I	A	L	L	S	T	G	N	F	.	.	.	.	.	N	E	T	T	A	R	I	Y	S	D	T	T	L	X	T	A	N	T	D	I	V	H
Template Known Secondary structure			T								T	T			B	.	.	.	.	.	.	.	.	.	.	.													S	S	S										S	S		S	.	.	.	.	.	S				S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.												.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.						.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		D	I	L	Q	F	E	L	E	N	L	P	G	Q	S	A	A	R	R	W	W	R	R	H	H	K	A	E	E	N	R	Q	P	G	E	A	Q	V	L	L	V	W	R	D	N	E	E	H	R	D	D	I	E	R	H	Y	L	K	M	L	T	Q	A	R	R	.	.	.	.	E	V	I	I	A	N	A	Y	F	F	P	G
Query Conservation																																																																		.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.											.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		D	V	Y	R	L	F	R	I	L	D	G	D	P	E	P	A	R	F	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	A	R	Y	N	X	G	E	A	I	T	N	L	I	E	R	E	I	E	N	V	K	R	G	K	R	G	Y	X	L	L	K	X	N	G	L	Q	.	D
Template Known Secondary structure											T	T					S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T																		T	T										S		B		.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.																				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.								.	.	.
Query SS confidence																																																										.								.	.	.
Query Sequence		Y	R	F	L	H	A	L	R	K	A	A	R	R	G	V	R	I	K	L	I	I	Q	G	E	P	D	M	P	I	V	R	V	G	A	R	L	L	Y	N	Y	L	V	K	G	G	V	Q	V	F	E	Y	R	R	R	P	L	.	H	G	K	V	A	L	M	.	.	.	D	D	H	W	A	T	V	G	S	S	N	L	D
Query Conservation																																																										.								.	.	.
Alig confidence																																			.		.	.	.	.	.	.	.	.														.								.	.	.
Template Conservation																																			.		.	.	.	.	.	.	.	.
Template Sequence		K	N	V	I	T	Q	L	Y	R	A	S	E	A	G	V	E	I	D	L	I	V	R	G	I	C	C	L	V	P	D	X	P	Q	.	S	.	.	.	.	.	.	.	.	R	N	I	R	V	T	R	L	V	D	X	Y	L	E	H	S	R	I	W	C	F	H	N	G	G	K	E	E	V	F	I	S	S	A	D	W	X
Template Known Secondary structure														T	T								S	S		B		S			S	S	G	G	.	G	.	.	.	.	.	.	.	.	T	T								S	S	S											G	G	G	S							S			B
Template Predicted Secondary structure																																			.		.	.	.	.	.	.	.	.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580									.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	L	S	L	N	L	E	A	N	V	I	I	H	D	R	H	F	N	Q	T	L	R	D	N	L	N	G	I	I	A	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	N	L	Y	N	R	I	E	T	A	C	P	V	L	D	P	T	L	R	R	E	I	I	D	I	L	E	I	Q	L	R	D	N
Template Known Secondary structure							T	S	B								S
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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