Job Description P0AA84 Confidence 7.15% Date Thu Jan 5 11:12:11 GMT 2012 Rank 66 Aligned Residues 74 % Identity 11% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	L	E	N	G	E	Q	Y	Y	P	A	V	F	K	A	I	G	E	A	Q	E	R	I	I	L	E	T	F	.	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	R	G	V	K	A	E	V	L	L	D	G	Y	G	S	P	D	L	S	D	E	F	V	N	E	L	T	A
Query Conservation																														.
Alig confidence																														.																										.
Template Conservation																																																								.
Template Sequence		C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	.	I	I	V	D	T	S	G	R	H	K	Q	E	D	S	L	F	E	E	M	L	Q
Template Known Secondary structure									S	S	S														T										S																T	T				.										T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions