Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA84
Confidence17.76%DateThu Jan 5 11:12:11 GMT 2012
Rank30Aligned Residues86
% Identity15%Templatec2hqbA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60. ........70.........80.........90.........100.........110.....
Predicted Secondary structure 



.

































Query SS confidence 
























.





















































Query Sequence  LETFIWFEDDVGKQLHAALLAAAQR. GVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRK
Query Conservation 
  
    
  
  
  

  

 
.

 



 
  
           
   
                     
 
 
Alig confidence 
























.



.
















































Template Conservation   

 

 
  
      

       
  
.               
   
    
 

                     
Template Sequence  XVGLLVEDTGWNRKAYEGLLNIHSNLDVDV. VLEEGVNSEQKAHRRIKELVDGGVNLIFGHGHAFAEYFSTIHNQYPDVH
Template Known Secondary structure 





TS

.



STT


STTTTTS
TTS
Template Predicted Secondary structure 






.


















Template SS confidence 















































































   1........10.........20.........30 .........40.........50.........60.........70.........
 
   116...120...
Predicted Secondary structure 


Query SS confidence 







Query Sequence  IVVIDARI
Query Conservation    


   
Alig confidence 







Template Conservation   
  
   
Template Sequence  FVSFNGEV
Template Known Secondary structure  S


Template Predicted Secondary structure 



Template SS confidence 







   84.....90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions