Job Description P0AA84 Confidence 100.00% Date Thu Jan 5 11:12:11 GMT 2012 Rank 3 Aligned Residues 285 % Identity 17% Template c1xdoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of escherichia coli polyphosphate kinase Resolution 3.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																																															.	.
Query SS confidence																							.	.	.	.	.																																															.	.
Query Sequence		L	L	E	N	G	E	Q	Y	Y	P	A	V	F	K	A	I	G	E	A	Q	E	.	.	.	.	.	R	I	I	L	E	T	F	I	W	F	E	D	D	V	G	K	Q	L	H	A	A	L	L	A	A	A	Q	R	G	V	K	A	E	V	L	L	D	G	Y	G	S	P	D	L	S	D	.	.	E	F	V	N	E	L
Query Conservation																							.	.	.	.	.																																															.	.
Alig confidence																							.	.	.	.	.														.	.	.																															.	.
Template Conservation																																									.	.	.
Template Sequence		L	L	Y	Y	P	Y	H	T	F	E	H	V	L	E	L	L	R	Q	A	S	F	D	P	S	V	L	A	I	K	I	N	I	Y	R	V	A	K	D	S	.	.	.	R	I	I	D	S	M	I	H	A	A	H	N	G	K	K	V	T	V	V	V	E	L	Q	A	R	F	D	E	E	A	N	I	H	W	A	K	R	L
Template Known Secondary structure					T	T	T	B		T											T	T		T	T									S	S			S	S		.	.	.												T										S			S	S			G	G	G	S	S	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																																.
Query SS confidence																																								.	.	.	.	.	.	.																																.
Query Sequence		T	A	A	G	V	V	F	R	Y	Y	D	P	R	P	R	L	F	G	M	R	T	N	V	F	R	R	M	H	R	K	I	V	V	I	D	A	R	I	.	.	.	.	.	.	.	A	F	I	G	G	L	N	Y	S	A	E	H	M	S	S	Y	G	P	E	A	K	Q	D	Y	A	V	R	L	E	G	P	.	I	V	E
Query Conservation																																								.	.	.	.	.	.	.																																.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.									.	.	.	.	.																			.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		T	E	A	G	V	H	V	I	F	S	A	P	.	.	.	.	.	.	.	.	.	.	.	G	L	K	I	H	A	K	L	F	L	I	S	R	K	E	N	G	E	V	V	R	Y	A	H	I	G	T	G	N	F	.	.	.	.	.	N	E	K	T	A	R	L	Y	T	D	Y	S	L	L	T	A	D	A	R	I	T	N
Template Known Secondary structure					T								T	.	.	.	.	.	.	.	.	.	.	.	T			B												T	T										S	S		S	.	.	.	.	.		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460						.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		D	I	L	Q	F	E	L	E	N	L	P	G	Q	S	A	A	R	R	W	W	R	R	H	H	K	A	E	E	N	R	Q	P	G	E	A	Q	V	L	L	V	W	R	D	N	E	E	H	R	D	D	I	E	R	H	Y	L	K	M	L	T	Q	A	R	R	.	.	.	E	V	I	I	A	N	A	Y	F	F	P	G	Y
Query Conservation																																																																		.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	R	R	V	F	N	F	I	E	N	P	Y	R	P	V	T	F	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	V	S	P	Q	N	S	R	R	L	L	Y	E	M	V	D	R	E	I	A	N	A	Q	Q	G	L	P	S	G	I	T	L	K	L	N	N	L	V	D	K
Template Known Secondary structure													T	T	S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	T																T	T	T										S		B
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.																				.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																									.								.	.	.
Query SS confidence																																																									.								.	.	.
Query Sequence		R	F	L	H	A	L	R	K	A	A	R	R	G	V	R	I	K	L	I	I	Q	G	E	P	D	M	P	I	V	R	V	G	A	R	L	L	Y	N	Y	L	V	K	G	G	V	Q	V	F	E	Y	R	R	R	P	L	.	H	G	K	V	A	L	M	.	.	.	D	D	H	W	A	T	V	G	S	S	N	L	D	P
Query Conservation																																																									.								.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.																.								.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L	L	V	R	G	M	C	S	L	I	P	N	L	E	G	.	.	.	.	.	.	.	.	I	S	D	N	I	R	A	I	S	I	V	D	R	Y	L	E	H	D	R	V	Y	I	F	E	N	G	G	D	K	K	V	Y	L	S	S	A	D	W	M	T
Template Known Secondary structure													T	T								S	S		B				S			T	T	.	.	.	.	.	.	.	.	T	S	T	T									S	S												T	T	S							S			B	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.									.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	S	L	N	L	E	A	N	V	I	I	H	D	R	H	F	N	Q	T	L	R	D	N	L	N	G	I	I	A	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	I	D	Y	R	I	E	V	A	T	P	L	L	D	P	R	L	K	Q	R	V	L	D	I	I	D	I	L	F	S	D	T
Template Known Secondary structure						T	S	B								S																T		S
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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