Return to main results Retrieve Phyre Job Id

Job DescriptionP13959
Confidence19.04%DateThu Jan 5 11:33:47 GMT 2012
Rank46Aligned Residues40
% Identity18%Templatec1q5vB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:nickel responsive regulator; PDBTitle: apo-nikr
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60...... ...70.........80...
Predicted Secondary structure 




.
Query SS confidence 






















.
















Query Sequence  FHAVIQARLKDRLSELADEEGIT. QAQMLEKLIESELKRRA
Query Conservation 
 


 
 

  
 


   


.


 

 

  
  

 
Alig confidence 






















.
















Template Conservation 





  

  

  
   

 



 





  
 
  
Template Sequence  VTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
Template Known Secondary structure 





T

STT

Template Predicted Secondary structure 





Template SS confidence 








































   4.....10.........20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions