Job Description P0ADM6 Confidence 3.34% Date Thu Jan 5 11:21:22 GMT 2012 Rank 17 Aligned Residues 101 % Identity 13% Template d1ny711 SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Comoviridae-like VP Resolution 3.00

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	Q	A	K	D	S	N	G	T	K	G	Y	V	F	V	G	E	S	L	D	Y	L	I	T	D	G	A	D	D	I	V	K	M	L	N	D	P	A	L	N	R	H	N	I	Q	V	A	D	D	A	R	F	V	L	N	A	G	K	K	K	F	T	G	T	I	S	L	Y	Y	Y	W	N	N	E	E	E	K	A
Query Conservation
Alig confidence																																.																								.
Template Conservation																																.																								.
Template Sequence		D	V	T	A	V	T	F	D	L	I	N	G	K	I	T	P	V	G	D	D	N	W	N	T	H	I	Y	N	P	P	.	I	M	N	V	L	R	T	A	A	W	K	S	G	T	I	H	V	Q	L	N	V	R	G	.	A	G	V	K	R	A	D	W	D	G	Q	V	F	V	Y	L	R	Q	S	M	N	P	E	S	Y
Template Known Secondary structure		S								T	T	T	T						S	S												.																								.					G	G	G											S			S	T	T	S
Template Predicted Secondary structure																																.																								.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	H	Y	G	F	A	C	G	V	Q	H	C	T	R	S	L	E	N	L	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	R	T	F	V	I	S	Q	P	G	S	A	M	L	N	F	S	F	D	I	I	G
Template Known Secondary structure											S	S												B
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions