|   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | N | S | V | M | Q | V | P | R | V | E | K | I | T | L | N | M | G | V | G | E | A | I | A | D | K | K | L | L | D | N | A | A | A | D | L | A | A | I | S | G | Q | K | P | L | I | T | K | A | R | K | S | V | A | G | F | K | I | R | Q | G | Y | P | I | G | C | K | V | T | L | R | G | E | R | M | W | E | F | F |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|   | . | . | . |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|
|
Template Sequence |   |
K | K | E | N | K | M | R | E | V | K | I | A | K | L | V | I | N | C | C | V | G | E | S | G | . |
. |
. |
D | K | L | T | K | A | A | K | V | L | K | D | L | S | G | Q | E | P | V | F | S | R | A | R | Y | T | I | R | S | F | G | I | K | R | N | E | K | M | A | V | H | V | T | I | R | G | D | K | A | R | D | I | L |
Template Known Secondary structure |   |
|
|
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| S | S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |
| S |
| B | T | T | T | T | B |
| S | S |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | L | I | T | I | A | V | P | R | I | R | D | F | R | G | L | S | A | K | S | F | D | G | R | G | N | Y | S | M | G | V | R | E | Q | I | I | F | P | E | I | D | Y | D | K | V | D | R | V | R | G | L | D | I | T | I | T | T | T | A | K | S | D | E | E | G | R |
Query Conservation |   |
  |
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . |   |
|
|
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
| . |
|   |
|
|   |   |   |   |
|   |
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|   |   |
Template Sequence |   |
T | R | G | L | K | V | K | E | M | E | L | R | K | . |
. |
. |
. |
. |
. |
K | N | F | S | N | T | G | N | F | G | F | G | I | Q | E | H | I | D | L | G | . |
M | K | Y | D | P | S | T | G | I | F | G | M | D | F | Y | V | V | L | E | R | P | G | T | R | V | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |  |  |
| G | . | . | . | . | . | . | G | G | B |
| T | T | S |
|  |  |  |  |  |
|
| G | G | G | G | T | . |
|
|
|
| G | G | G |
|
|
|
|  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |