Job Description P62399 Confidence 100.00% Date Thu Jan 5 12:07:30 GMT 2012 Rank 7 Aligned Residues 126 % Identity 34% Template c1s1iJ_ PDB info PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l11; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	M	Q	V	P	R	V	E	K	I	T	L	N	M	G	V	G	E	A	I	A	D	K	K	L	L	D	N	A	A	A	D	L	A	A	I	S	G	Q	K	P	L	I	T	K	A	R	K	S	V	A	G	F	K	I	R	Q	G	Y	P	I	G	C	K	V	T	L	R	G	E	R	M	W	E	F	F	E	R	L
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		N	P	M	R	D	L	K	I	E	K	L	V	L	N	I	S	V	G	E	S	G	.	.	.	D	R	L	T	R	A	S	K	V	L	E	Q	L	S	G	Q	T	P	V	Q	S	K	A	R	Y	T	V	R	T	F	G	I	R	R	N	E	K	I	A	V	H	V	T	V	R	G	P	K	A	E	E	I	L	E	R	G
Template Known Secondary structure			T	T	T	S												S	S		S	S	.	.	.	S	S	S	S		S	S	S	T	T	S	S	S	S	S													S	S	S				S	S											S	S	S	S	S	S	S	S	S	S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	I	A	V	P	R	I	R	D	F	R	G	L	S	A	K	S	F	D	G	R	G	N	Y	S	M	G	V	R	E	Q	I	I	F	P	E	I	D	Y	D	K	V	D	R	V	R	G	L	D	I	T	I	T	T	T
Query Conservation
Alig confidence												.	.	.	.	.	.																					.
Template Conservation												.	.	.	.	.	.																					.
Template Sequence		L	K	V	K	E	Y	Q	L	R	D	.	.	.	.	.	.	R	N	F	S	A	T	G	N	F	G	F	G	I	D	E	H	I	D	L	G	.	I	K	Y	D	P	S	I	G	I	F	G	M	D	F	Y	V	V	M	N
Template Known Secondary structure		S	S	S	S		T	T		S	S	.	.	.	.	.	.	T	T	S		T	T	S									S				S	.	S	S	S							S	T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.																					.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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