Job Description P0AEP9 Confidence 99.35% Date Thu Jan 5 11:23:54 GMT 2012 Rank 34 Aligned Residues 236 % Identity 16% Template d1w1oa1 SCOP info Ferredoxin-like FAD-linked oxidases, C-terminal domain Cytokinin dehydrogenase 1 Resolution 1.7

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.																		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	V	A	R	V	L	L	A	S	F	D	S	V	E	K	A	G	L	A	V	G	D	I	I	A	N	G	I	I	.	.	P	G	G	L	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	N	L	S	I	R	A	A	E	D	F	I	H	A	G	Y	P	V	D	A	E	A	I	L
Query Conservation																																.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		P	A	R	A	R	W	V	R	F	V	Y	T	D	F	A	A	F	S	A	D	Q	E	R	L	T	A	P	R	S	F	G	P	M	S	Y	V	E	G	S	V	F	V	N	Q	S	L	A	T	D	L	A	N	T	G	F	F	T	D	A	D	V	A	R	I	V	A	L	A	G	E	R	.	.	.	N	A	T	T	V	Y
Template Known Secondary structure													S															B			B		S		S									G	G	G							T	T	S	S	S															T	.	.	.	T		S
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	L	D	G	V	E	S	D	V	Q	E	D	C	E	R	V	N	D	I	L	L	K	A	G	A	T	D	V	R	L	A	Q	D	E	A	E	R	V	R	F	W	A	G	R	K	N	A	F	P	A	V	G	R	I	S	P	D	Y	Y	C	M	D	G	T	I	P	R	R	A	L	P	G	V	L	E	G	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	E	A	T	L	N	Y	A	A	V	D	Q	E	L	A	S	V	L	G	T	L	S	Y	V	E	G	F	A	F	Q	R	D	V	A	Y	A	A	F	L	D	R	V	H	G	E	E	V	A	L	N	K	L	G	L	W	R	V	P	H	P	W	L	N	M	F	V	P	R	S	R	I	A	D	F	D	R	G	V	F
Template Known Secondary structure																					T	T					T	T														T												T	T		S	S	S											G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		372		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	.	L	S	Q	Q	Y	D	L	R	V	A	N	V	F	H	A	G	D	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	P	L	I	L	F	D	A	N	E	P	G	E	F	A	R	A	E	E	L	G	G	K	I	L	E	L	C	V	E	V	G	G	S	I	S	G	E	H	G	I	G	R
Query Conservation			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																								.
Template Conservation																																																		.	.																								.
Template Sequence		K	G	I	L	Q	G	T	D	I	V	G	P	L	I	V	Y	P	L	N	K	S	M	W	D	D	G	M	S	A	A	T	P	S	E	D	V	F	Y	A	V	S	L	L	F	S	S	N	D	.	.	L	A	R	L	Q	E	Q	N	R	R	I	L	R	F	C	D	L	A	G	I	Q	Y	K	.	T	Y	L	A	R	H
Template Known Secondary structure		T	T	T	T	T	T	S				S									G	G	G	S		T	T	S	S					S	S	S														.	.																		T	T					.		S	S
Template Predicted Secondary structure																																																		.	.																								.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.			.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	N	Q	M	C	A	Q	F	N	S	D	E	I	T	T	F	H	A	V	K	A	A	F	D	P	D	G	L	L	N	P	G	K	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	R	S	D	W	V	R	H	F	G	A	A	K	W	N	R	F	V	E	M	K	N	K	Y	D	P	K	R	L	L	S	P	G	Q	D	I
Template Known Secondary structure		S	S																									T	T			S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions