Job Description P0AEP9 Confidence 38.05% Date Thu Jan 5 11:23:54 GMT 2012 Rank 80 Aligned Residues 60 % Identity 12% Template c3s01A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of a heterogeneous nuclear ribonucleoprotein l2 (hnrpl) from mus musculus at 2.15 a resolution Resolution 2.15 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		L	D	G	E	A	L	T	L	G	S	D	A	L	D	S	P	G	F	D	.	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	F	D	S	V	E	K	A	G	L	A	V	G	D	I
Query Conservation																					.
Alig confidence																					.							.	.	.	.											.	.	.	.
Template Conservation																												.	.	.	.											.	.	.	.
Template Sequence		A	D	S	P	V	L	X	V	Y	G	L	D	Q	S	K	X	N	C	D	R	V	F	N	V	F	C	.	.	.	.	L	Y	G	N	V	E	K	V	K	F	.	.	.	.	X	K	S	K	P	G	A	A	X	V	E	X	A	D	G	Y	A	V	D	R	A	I	T	H	L
Template Known Secondary structure			S	S	S						S			T	T	T											T	.	.	.	.	T	T	S								.	.	.	.		T	T	S	T	T							S	S
Template Predicted Secondary structure																												.	.	.	.											.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions