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Job DescriptionP0AEP9
Confidence100.00%DateThu Jan 5 11:23:54 GMT 2012
Rank13Aligned Residues434
% Identity17%Templatec3popD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:gilr oxidase; PDBTitle: the crystal structure of gilr, an oxidoreductase that catalyzes the2 terminal step of gilvocarcin biosynthesis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  PGLEILHTDEEIIPYECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARF
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Template Sequence  PPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLDLHNL
Template Known Secondary structure 

TTSTTT

SSTTS



S
SSTT

SS


SSSTTTSS

S
TT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  KEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIEVQTLDG
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Template Sequence  HAI. GPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGA. CSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDE
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SSSSSTT
BSB




S.BTT
B



TT

GGGG
T
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   86.. .90.........100.........110.........120.... .....130.........140.........150.........160...
 
   190.........200... ......210. ........220.........230.........240... ....
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Query Sequence  EALTLGSDALDSPG. . . FDLLALFT. GSEGMLGVTTEVTVKLLPKPPVARVLLASFDS. . . . . . . . . . . . . . . . . . VEKA
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Template Sequence  SRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTV
Template Known Secondary structure  TS
TT

TTTS
TTSS



TTT
BTTTTB
B

SGGG

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  GLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDE
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Template Sequence  MRRFFEWHERHSEPGSPESSL. . . . . . . FATFFVNHVSSGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPRGGV
Template Known Secondary structure  S

TT
GGGG.......
GGG
TTT
TT
SSSS


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   244.....250.........260.... .....270.........280.........290.........300.........310......
 
   328.330.........340.........350.........360.........370.........380........
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Query Sequence  AERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAG. . . . . . . . . . . . . . . . . . .
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Template Conservation               .                                                                 
Template Sequence  MSWLTGTRYMSQA. DCGDVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQR
Template Known Secondary structure  T
B
.S
GGGTT
SS


TSSS

TT

GGGGGS
TTTSS



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   317..320......... 330.........340.........350.........360.........370.........380.........390.....
 
   389390.........400.........410.........420.........430..... ....440.........450.
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Query Sequence  DGNMHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGR. . . . . . . . . . . . . . . . . EKINQMCAQFNSDEIT
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Template Conservation                                                   
 

                    
 
    
Template Sequence  DSVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPARNRSGEPWHHLYYKDNYA
Template Known Secondary structure  S
SS
GGGTGGGTTS

TTSSB



TTS

GGGG
TTT

SS

GGG
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   396...400.........410.........420.........430.........440.........450.........460.........470.....
 
   452.......460.........470...
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Query Sequence  TFHAVKAAFDPDGLLNPGKNIP
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Template Sequence  RLRSAKRAWDPLNTFHHSMSIG
Template Known Secondary structure 
TT

S

TT


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   476...480.........490.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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