Job Description P0AEP9 Confidence 100.00% Date Thu Jan 5 11:23:54 GMT 2012 Rank 9 Aligned Residues 440 % Identity 13% Template c3fwaA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:reticuline oxidase; PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		V	L	M	A	L	R	E	H	V	P	G	L	E	I	L	H	T	D	E	E	I	I	P	Y	E	C	D	.	.	.	.	.	.	.	.	.	G	L	S	A	Y	R	T	R	P	L	L	V	V	L	P	K	Q	M	E	Q	V	T	A	I	L	A	V	C	H	R	L	R	V	P	V	V	T	R	G	A	G	T	G	L
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	S	C	L	T	F	N	G	V	R	N	H	T	V	F	S	A	D	S	D	S	D	F	N	R	F	L	H	L	S	I	Q	N	P	L	F	Q	N	S	L	I	S	K	P	S	A	I	I	L	P	G	S	K	E	E	L	S	N	T	I	R	C	I	R	K	G	S	W	T	I	R	L	R	S	G	G	H	S	Y
Template Known Secondary structure									T	T									S		T	T	S									T				G	G	G		S	T	T	S				S							S													T	T	T							S	S				T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		92	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	G	G	A	L	P	L	.	E	K	G	V	L	L	V	M	A	R	F	K	E	I	L	D	I	N	P	V	G	R	R	A	R	V	Q	P	G	V	R	N	L	A	I	S	Q	A	V	A	P	H	N	L	Y	Y	A	P	D	P	S	S	Q	I	A	C	S	I	G	G	N	V	A	E	N	A	G	G	V	H	C	L
Query Conservation									.
Alig confidence									.															.
Template Conservation																								.
Template Sequence		E	G	L	S	Y	T	S	D	T	P	F	I	L	I	D	L	M	N	L	N	R	V	.	S	I	D	L	E	S	E	T	A	W	V	E	S	G	S	T	L	G	E	L	Y	Y	A	I	T	E	S	S	S	K	L	G	F	T	A	G	W	A	P	T	V	G	T	G	G	H	I	S	G	G	G	F	G	M	M	S	R
Template Known Secondary structure		T		T	T	S			S	S								T	T					.				T	T	T	T						T	T		B													S	S							S		T	T	S	B							T					T	T
Template Predicted Secondary structure																								.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		K	Y	G	L	T	V	H	N	L	L	K	I	E	V	Q	T	L	D	G	E	A	L	T	L	G	S	D	A	L	D	S	P	G	F	D	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	F	D	.	.	.	.	S	V	E	K
Query Conservation																																																																										.	.	.	.
Alig confidence																																.	.	.	.																																							.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		K	Y	G	L	A	A	D	N	V	V	D	A	I	L	I	D	A	N	G	A	I	L	D	R	Q	A	M	G	E	D	.	.	.	.	V	F	W	A	I	R	G	G	G	G	G	V	W	G	A	I	Y	A	W	K	I	K	L	L	P	V	P	E	K	V	T	V	F	R	V	T	K	N	V	A	I	D	E	A	T	S
Template Known Secondary structure						G	G	G	G									T	T													.	.	.	.						T	T	S		T	T	S	S															S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	A	V	G	D	I	I	A	N	G	I	I	P	G	G	L	E	M	M	D	N	L	S	I	R	A	A	E	D	F	I	H	A	G	Y	P	V	D	A	E	A	I	L	L	C	E	L	D	G	V	E	S	D	V	Q	E	D	C	E	R	V	N	D	I	L	L	K	A	G	A	T	D	V	R	L	A	Q	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	H	K	W	Q	F	V	A	E	E	L	E	E	D	F	T	L	S	V	L	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	D	E	K	Q	V	W	L	T	M	L	G	F	H	F	G	L	K	T	V	A	K	S	T	F	D	L	L	F	P	E	L	G	L	V	E	E	D	Y	L	E	M	S	W	G
Template Known Secondary structure													S		T	T										.	.	.	.	.	.	.	.	.	.	.	.		T	T											S	S														G	G	G				G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.													.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure											.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	E	R	V	R	F	W	A	.	.	G	R	K	N	A	F	P	A	V	G	R	I	S	P	D	Y	Y	C	M	D	G	T	I	P	R	R	A	L	P	G	V	L	E	G	I	A	R	L	S	Q	Q	Y	D	L	R	V	A	N	V	F	H	A	G	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	F	A	Y	L	A	G	L	E	T	V	S	Q	L	N	N	R	F	L	K	F	D	E	R	A	F	K	T	K	V	D	L	T	K	E	P	L	P	S	K	A	F	Y	G	L	L	E	R	L	S	K	E	P	N	G	F	I	A	L	N	G	F	G	G	Q	M	S	K	I	S	S	D	F	T	P	F	P	H	R
Template Known Secondary structure								T	T		S		G	G	G	G	G		T	T	S		S													S	S																T		T	T										G	G	G	G	T	S		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
							391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.																						.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	N	M	H	P	L	I	L	F	D	A	N	E	P	G	E	F	A	R	A	E	E	L	G	G	K	I	L	E	L	C	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	S	I	S	G	E	H	G	I	G	R	E	K	I	N	Q	M	C	A	Q
Query Conservation		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	T	R	L	M	V	E	Y	I	V	A	W	N	Q	S	E	Q	K	K	K	T	E	F	L	D	W	L	E	K	V	Y	E	F	M	K	P	F	V	S	K	N	P	R	L	G	Y	V	N	H	I	D	L	D	L	G	G	I	D	W	G	N	K	T	V	V	N	N	A	I	E	I	S	R	S	W	G	E	S	Y
Template Known Secondary structure		T	T													G	G	G	G	G	G																T	T	T	S			S	S					G	G	G			G	G	G					T	T							T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	S	D	E	I	T	T	F	H	A	V	K	A	A	F	D	P	D	G	L	L	N	P	G	K	N	I	P	T	L	H	R	C
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		F	L	.	S	N	Y	E	R	L	I	R	A	K	T	L	I	D	P	N	N	V	F	N	H	P	Q	S	I	P	P	M	A	N	F
Template Known Secondary structure			G	.	G	G													T	T			S			T	T
Template Predicted Secondary structure				.
Template SS confidence
		490	.		.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.