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Job DescriptionP0AEP9
Confidence100.00%DateThu Jan 5 11:23:54 GMT 2012
Rank15Aligned Residues433
% Identity15%Templatec2y3rC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:taml; PDBTitle: structure of the tirandamycin-bound fad-dependent2 tirandamycin oxidase taml in p21 space group
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  LEILHTDEEIIPYECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKE
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Template Sequence  DSVAPGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSA
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TTSTTT

S
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  ILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIEVQTLDGEA
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Template Sequence  V. GFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGGA. CPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASG
Template Known Secondary structure  .TTTTTT
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   85 ....90.........100.........110.........120. ........130.........140.........150.........160..
 
   192.. .....200.........210.. .......220.........230.........240... ......250
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Query Sequence  LTL. . . GSDALDSPGFDLLALFTG. SEGMLGVTTEVTVKLLPKPPVARVLLASFDS. . . . . . . . . . . . . . . . . VEKAGLA
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Template Sequence  DARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRN
Template Known Secondary structure 
S
TT
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   251........260.........270.........280.........290.........300.........310........ .320........
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Query Sequence  VGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGA. . TDVRLAQDEA
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Template Sequence  HGRWFEQNSG. . . . . . . PDSPWCDLYSVLALTRSQSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPW
Template Known Secondary structure  S
S.......TT
GGGG
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   246...250..... ....260.........270.........280.........290.........300.........310........
 
   329330.........340.........350.........360.........370.........380.... .....390...
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Query Sequence  ERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANV. . . . . . . . . . . . . . . FHAGDGNMH
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Template Conservation                                                                                  
Template Sequence  LHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDDNPAGVVALIAYGGKVNAVPADRTAVAQRDSILK
Template Known Secondary structure  TS





SSS







TT


GGGGGS
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   319320.........330.........340.........350.........360.........370.........380.........390........
 
   394.....400.........410.........420.........430.... .....440.........450......
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Query Sequence  PLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIG. . . . . . . . . . . . . . . . . REKINQMCAQFNSDEITTFHAV
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Template Conservation                                              
 
  
                  
 
     
  
Template Sequence  IVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEEWNTSGVPWSELYYKDAYPRLQAV
Template Known Secondary structure 

TT
TGGGTTS

TTTTB



TTS

GGGG
TTT

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GGG
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   400.........410.........420.........430.........440.........450.........460.........470.........
 
   457..460.........470...
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Query Sequence  KAAFDPDGLLNPGKNIP
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Template Sequence  KARWDPRNVFRHALSVR
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TT

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   480.........490......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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