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Job DescriptionP0AEP9
Confidence100.00%DateThu Jan 5 11:23:54 GMT 2012
Rank16Aligned Residues394
% Identity17%Templatec2vfvA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:xylitol oxidase; PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  CDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPVGRRARVQ
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Template Sequence  TNWAGNITYTAKELLRPHSLDALRALVADSA. . . . RVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVG
Template Known Secondary structure  B
SSSS
B
S
SS
B

SS
S....SSS



SSTT


TT
STTS


TTTT
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   7..10.........20.........30....... ..40.........50.........60.........70.........80..
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  PGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIEVQTLDGEALTLGSDALDSPGFD
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Template Sequence  GGVRYAELARVVHARGLALPNMAS. LPHISVAGSVATGTHG. SGVGNGSLASVVREVELVTADGSTVVIA. . . . . . RGDE
Template Known Secondary structure  TT
BTT
S


S.SS
SBT


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TT


GGGG
TTS
......TTST
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   83......90.........100...... ...110.........120.. .......130.........140.........150 ....
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  LLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPV
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Template Sequence  RFGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAYSVSLFTDWR. . . . . . . . . . . . . . APG
Template Known Secondary structure  TGGGTSSSTTTT




STT

TSSS
SS..............SSS
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   155....160.........170.........180.........190.........200.........210....... ..220
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  DAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRALPG
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Template Sequence  FRQVWLKRRTDRPLDGFPYAAPAAEKMHPVPGMPAVNCTEQFGVPGPWHERLPHFRAEFTPSSGAELQSEYLMPREHALA
Template Known Secondary structure  TTS




TTS
SS


SSTTS
GGGB


TT

GGGTSSSB
TT


S

S
GGG
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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   366...370.........380.........390. ........400.........410.........420.........430......
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Query Sequence  VLEGIARLSQQYDLRVANVFHAGDGN. . . . . . . . . MHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGRE
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Template Sequence  ALHAMDAIRETLAPVLQTCEIRTVAADAQWLSPAYGRDTVAAHFTWVEDTAAVLPVVRRLEEALVPFAARPHWG. KVFTV
Template Known Secondary structure  TGGG

B
STT
TTBTS

S
GGGT

TT.S



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   301........310.........320.........330.........340.........350.........360.........370.... .....
 
   437..440.........450.........460...... ..
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Query Sequence  KINQMCAQFNSDEITTFHAVKAAFDPDGLL. NP
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Template Sequence  PAGELRALYP. . RLADFGALAGALDPAGKFTNA
Template Known Secondary structure 
TT
T..T
TT
TT

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   380......... 390.........400.........410
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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