Job Description P0AEP9 Confidence 100.00% Date Thu Jan 5 11:23:54 GMT 2012 Rank 3 Aligned Residues 403 % Identity 21% Template c2uuvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase; PDBTitle: alkyldihydroxyacetonephosphate synthase in p1 Resolution 1.99 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	L	P	D	V	D	R	T	S	V	L	M	A	L	R	E	H	V	P	G	L	E	I	L	H	T	D	E	E	I	I	P	Y	E	C	D	.	.	.	.	.	.	.	.	.	G	L	S	A	Y	R	T	R	P	L	L	V	V	L	P	K	Q	M	E	Q	V	T	A	I	L	A	V	C	H	R	L	R	V	P	V
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	P	P	K	Q	Y	P	E	F	V	R	E	L	K	A	F	F	L	P	D	Q	L	K	D	D	K	L	A	R	I	T	H	T	F	G	K	S	L	R	D	L	I	R	V	R	I	G	Q	V	K	N	A	P	D	L	I	V	L	P	H	S	H	E	E	V	E	R	L	V	Q	L	A	H	K	Y	N	V	V	I
Template Known Secondary structure																			S		G	G	G				S							T	T			S	S									T	T							S							S															T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		V	T	R	G	A	G	T	G	L	S	G	G	A	L	P	L	E	K	G	.	V	L	L	V	M	A	R	F	K	E	I	L	D	I	N	P	V	G	R	R	A	R	V	Q	P	G	V	R	N	L	A	I	S	Q	A	V	A	P	H	N	L	Y	Y	A	P	D	P	S	S	Q	I	A	C	S	I	G	G	N	V	A
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		I	P	M	G	G	G	S	N	I	V	G	A	I	E	P	V	E	R	F	T	V	S	I	D	M	R	R	M	N	K	V	L	W	V	D	R	R	E	M	T	A	C	I	Q	V	G	I	M	G	P	E	L	E	K	Q	L	H	K	Q	G	V	S	L	G	H	D	P	D	S	F	E	F	S	T	L	G	G	W	L	A
Template Known Secondary structure					S	S				S	S		T	T	S												T	T									T	T	T	T						T	T		B										T	T	T								T	T	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	G	G	V	H	C	L	K	Y	G	L	T	V	H	N	L	L	K	I	E	V	Q	T	L	D	G	E	A	L	T	L	G	S	D	A	L	D	S	P	G	F	D	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	F
Query Conservation
Alig confidence																																.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		T	C	S	S	G	H	Q	S	D	K	Y	G	D	I	E	D	M	A	V	S	F	R	T	V	T	P	T	G	T	L	.	.	.	.	.	.	.	E	L	R	A	G	I	N	Y	K	H	I	I	L	G	S	E	G	T	L	G	I	I	T	E	A	V	M	K	V	H	A	V	P	Q	A	V	E	Y	Y	G	F	L	F
Template Known Secondary structure			T				T	T																			T	T				.	.	.	.	.	.	.								T					T	T		T	T	T	T															S
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		D	S	V	E	K	A	G	L	A	V	G	D	I	I	A	N	G	I	I	P	G	G	L	E	M	M	D	N	L	S	I	R	A	A	E	D	F	I	H	.	.	.	.	.	.	.	.	.	A	G	Y	P	V	D	A	E	A	I	L	L	C	E	L	D	G	V	E	S	D	V	Q	E	D	C	E	R	V	N	D	I
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	F	A	H	A	V	S	A	L	Q	Q	I	R	S	S	E	V	I	P	T	M	I	R	V	Y	D	P	E	E	T	Q	L	S	F	A	W	K	P	M	V	K	K	Y	L	H	Y	I	R	S	F	D	F	K	N	V	C	L	S	I	I	G	F	E	G	P	K	K	V	V	D	F	H	R	T	S	V	F	D	I
Template Known Secondary structure		S	S														T	T				S															T	T											T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		L	L	K	A	G	A	T	D	V	R	L	A	Q	D	E	A	E	R	V	R	F	W	A	G	R	K	N	A	F	P	A	V	G	R	I	.	.	.	.	S	P	D	Y	Y	C	M	D	G	T	I	P	R	R	A	L	P	G	V	L	E	G	I	A	R	L	S	Q	Q	Y	D	L	R	V	A	N	V	F	H	A	G
Query Conservation																																					.	.	.	.
Alig confidence																		.	.	.	.	.															.	.	.	.																														.										.	.
Template Conservation																		.	.	.	.	.																																																.										.	.
Template Sequence		L	S	K	N	A	A	F	G	L	G	S	A	P	G	K	T	.	.	.	.	.	W	A	E	K	R	Y	D	L	P	Y	I	R	D	F	L	L	D	H	N	M	W	V	D	V	A	E	T	T	V	S	Y	A	N	L	Q	T	L	W	K	D	A	K	Q	T	F	V	K	.	H	I	P	A	W	I	C	A	H	.	.
Template Known Secondary structure				T	T	T								S	S	S	G	.	.	.	.	.	G	G	G	G	G	G	G											T	T																													.										.	.
Template Predicted Secondary structure																		.	.	.	.	.																																																.										.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.						.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	N	M	H	P	L	I	L	F	D	A	N	E	P	G	E	F	A	R	A	E	E	L	G	G	K	I	L	E	L	C	V	E	V	G	G	S	I	S	G	E	H	G	I	G	R	E	K	I	N	Q	M	C	A	Q	F	N	S	D	E	I	T	T	F	H	A	V	K	A	A	F	D	P	D	G	L	L	N	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	H	T	Y	T	N	G	V	C	L	Y	.	.	.	F	I	F	A	S	K	Q	R	G	W	I	N	V	Y	R	S	L	K	E	T	I	D	P	K	D	I	C	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T						.	.	.									T														T	T			B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
																																						497	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.