Job Description P0AEP9 Confidence 26.19% Date Thu Jan 5 11:23:54 GMT 2012 Rank 103 Aligned Residues 65 % Identity 17% Template c2rneA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1 Resolution UNK

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	L	D	G	E	A	L	T	L	G	S	D	A	L	D	S	P	G	F	D	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	.	F	D	S	V	E	K	A	G	L	A	V	G	D	I
Query Conservation																																																									.
Alig confidence																												.	.	.	.																										.
Template Conservation																												.	.	.	.
Template Sequence		T	S	N	H	F	H	V	F	V	G	D	L	S	P	E	I	T	T	E	D	I	K	A	A	F	A	.	.	.	.	P	F	G	R	I	S	D	A	R	V	V	K	D	M	A	T	G	K	S	K	G	Y	G	F	V	S	F	F	N	K	W	D	A	E	N	A	I	Q	Q	M
Template Known Secondary structure			S	S	S							S			T	T											G	.	.	.	.	G	G												T	T	T		S										S	S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions