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Job DescriptionP0AEP9
Confidence100.00%DateThu Jan 5 11:23:54 GMT 2012
Rank7Aligned Residues435
% Identity15%Templatec2exrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cytokinin dehydrogenase 7; PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx)2 from arabidopsis thaliana at5g21482
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70....... ..80.........90.........100.........
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Query Sequence  GLEILHTDEEIIPYECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHR. LRVPVVTRGAGTGLSGGALPLEKGVLLVMARF
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Template Sequence  QGEILCGGAAADIAGRDFGGXNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAXA. EGGLVVDXSTT
Template Known Secondary structure  SS
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SSSTT

.TTSGGGG
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   37..40.........50.........60.........70.........80.........90.........100.... .....110.....
 
   110.. .......120.........130.........140.........150.........160.........170.........180...
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Query Sequence  KEI. . . . . . LDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIE
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Template Sequence  AENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELD
Template Known Secondary structure  TTS


SSSSSTT
BS
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SSBTT



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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  VQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGG
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Template Sequence  VVTGNGDVVTCS. . . . EIENSELFFSVLGGLGQFGIITRARVLLQPAPDXVRWIRVVYTEFDEFTQDAEWLVSQKNESSF
Template Known Secondary structure  TTS
....SSSSTT
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   196...200....... ..210.........220.........230.........240.........250.........260.........270.
 
   264.. ...270.........280.........290.........300.........310.........320.....
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Query Sequence  LEM. . . . . . . . . . . . . . . . . . MDNLSIRAAEDFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQ
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Template Sequence  DYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFE
Template Known Secondary structure  SSS

TTTSGGGS
SSTTS


GGGS
TT

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TTS
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TT
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   272.......280.........290.........300.........310.........320.........330.........340.........350.
 
   326...330.........340......... 350.........360.........370.........380.........390.
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Query Sequence  DEAERVRFWAGRKNAFPAVGRISP. . . DYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGN. . . . . . . . . . .
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Template Sequence  VDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELVKNGVNGPXLVYPLLRSRWDDRTSVVIP
Template Known Secondary structure  TTTTT
SSS








TTT

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   352.......360.........370.........380.........390.........400.........410.........420.........430.
 
   392.......400.........410.........420.........430.........440.........450.........460..
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Query Sequence  . . . . . . . . . MHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDP
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Template Sequence  EEGEIFYIVALLRFVPPCAKVSSVEKXVAQNQEIVHWCVKNGIDYK. LYLPHYKSQEEWIRHFG. NRWSRFVDRKAXFDP
Template Known Secondary structure  SS
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TTS
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   432.......440.........450.........460.........470....... ..480.........490.... .....500.........
 
   463......470..
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Query Sequence  DGLLNPGKNI
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Template Sequence  XAILSPGQKI
Template Known Secondary structure  T

B
GGG
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   510.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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