Job Description P0AEP9 Confidence 29.30% Date Thu Jan 5 11:23:54 GMT 2012 Rank 95 Aligned Residues 63 % Identity 21% Template c2dnoA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant; PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant Resolution UNK

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	A	L	T	L	G	S	D	A	L	D	S	P	G	F	D	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	F	D	S	V	E	K	A	G	L	A	V	G	D	I
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		E	D	R	K	L	F	V	G	M	L	G	K	Q	Q	T	D	E	D	V	R	K	M	F	E	.	.	.	.	P	F	G	T	I	D	E	C	T	V	L	R	G	P	D	G	T	S	K	G	C	A	F	V	K	F	Q	T	H	A	E	A	Q	A	A	I	N	T	L
Template Known Secondary structure				S						S			S	S											G	.	.	.	.	G	G	S											T	T												S	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions