Job Description P0AEP9 Confidence 100.00% Date Thu Jan 5 11:23:54 GMT 2012 Rank 4 Aligned Residues 430 % Identity 20% Template c1f0xA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase, a peripheral2 membrane respiratory enzyme. Resolution 1.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	S	V	L	M	A	L	R	E	H	V	P	G	L	E	I	L	H	T	D	E	E	I	I	P	Y	E	C	D	G	L	S	A	Y	R	T	R	P	L	L	V	V	L	P	K	Q	M	E	Q	V	T	A	I	L	A	V	C	H	R	L	R	V	P	V	V	T	R	G	A	G	T	G	L	S	G	G	A	L	P
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		N	K	A	F	L	N	E	L	A	R	L	V	G	S	S	H	L	L	T	D	P	A	K	T	A	R	Y	R	K	G	F	.	R	S	G	Q	G	D	A	L	A	V	V	F	P	G	S	L	L	E	L	W	R	V	L	K	A	C	V	T	A	D	K	I	I	L	M	Q	A	A	N	T	G	L	T	E	G	S	T	P
Template Known Secondary structure															G	G	G													B		S	.	S	S		B	B			S						S	S														T	T							S	S				S	S	S	T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		98						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure			.	.	.	.	.																																																			.
Query SS confidence			.	.	.	.	.																																																			.
Query Sequence		L	.	.	.	.	.	E	K	G	V	L	L	V	M	A	R	F	K	E	I	L	D	I	N	P	V	G	R	R	A	R	V	Q	P	G	V	R	N	L	A	I	S	Q	A	V	A	P	H	N	L	Y	Y	A	P	D	P	.	S	S	Q	I	A	C	S	I	G	G	N	V	A	E	N	A	G	G	V	H	C	L	K
Query Conservation			.	.	.	.	.																																																			.
Alig confidence			.	.	.	.	.																			.																																.
Template Conservation																										.
Template Sequence		N	G	N	D	Y	D	R	D	V	V	I	I	S	T	L	R	L	D	K	L	H	V	L	G	.	K	G	E	Q	V	L	A	Y	P	G	T	T	L	Y	S	L	E	K	A	L	K	P	L	G	R	E	P	H	S	V	I	G	S	S	C	I	G	A	S	V	I	G	G	I	C	N	N	S	G	G	S	L	V	Q	R
Template Known Secondary structure			B	S			S	S								T	T								T	.	T	T	T						T	T		B									G	G	G	T				S				G	G	G	G	G	T		B							T	T				S		T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																																																	.	.	.	.	200	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	L	T	V	H	N	L	L	K	I	E	V	Q	T	L	D	G	E	A	L	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	A	L	D	S	P	G
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	A	Y	T	E	M	S	L	F	A	R	I	N	E	D	G	K	L	T	L	V	N	H	L	G	I	D	L	G	E	T	P	E	Q	I	L	S	K	L	D	D	D	R	I	K	D	D	D	V	R	H	D	G	R	H	A	H	D	Y	D	Y	V	H	R	V	R	D	I	E	A	D	T	P	A	R	Y	N	A	D
Template Known Secondary structure			S	S			S									T	T	S								S	S	B				S	S										T	T				G	G	G	B				S			S	S		T	T								T	T		S	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.
Predicted Secondary structure																																																								.																								.
Query SS confidence																																																								.																								.
Query Sequence		F	D	L	L	A	L	F	T	G	S	E	G	M	L	G	V	T	T	E	V	T	V	K	L	L	P	K	P	P	V	A	R	V	L	L	A	S	F	D	S	V	E	K	A	G	L	A	V	G	D	I	I	A	N	.	G	I	I	P	G	G	L	E	M	M	D	N	L	S	I	R	A	A	E	D	F	I	H	.	A
Query Conservation																																																								.																								.
Alig confidence																				.																																				.																								.
Template Conservation																				.
Template Sequence		P	D	R	L	F	E	S	S	G	C	A	G	K	L	A	V	F	A	.	V	R	L	D	T	F	E	A	E	K	N	Q	Q	V	F	Y	I	G	T	N	Q	P	E	V	L	T	E	I	R	R	H	I	L	A	N	F	E	N	L	P	V	A	G	E	Y	M	H	R	D	I	Y	D	I	A	E	L	P	P	R	M	K
Template Known Secondary structure		G	G	G			S	S	T	T		T	T	S	S					.										S	S									S																	S	S			S
Template Predicted Secondary structure																				.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.								.	.	.	350	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		G	Y	P	V	D	A	E	A	I	L	L	C	E	L	D	G	V	E	S	D	V	Q	E	D	C	E	R	V	N	D	I	L	L	K	A	G	A	T	D	V	R	L	A	Q	D	E	A	E	R	V	R	F	W	A	G	R	K	N	A	F	P	A	V	G	R	.	.	.	.	.	.	.	I	S	P	D	Y	Y	C	M
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																				.	.																	.	.																												.	.	.	.	.	.	.
Template Conservation																				.	.																	.	.
Template Sequence		N	W	R	D	K	Y	E	H	H	L	L	L	K	M	A	G	D	G	.	.	V	G	E	A	K	S	W	L	V	D	Y	F	K	Q	A	E	.	.	G	D	F	F	V	C	T	P	E	E	G	S	K	A	F	L	H	R	F	A	A	A	G	A	A	I	R	Y	Q	A	V	H	S	D	E	V	E	D	I	L	A	L
Template Known Secondary structure								S									T	T		.	.															S	S	.	.																			T	T												T	T	T	T
Template Predicted Secondary structure																				.	.																	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	I	P	R	R	A	L	P	G	V	L	E	G	I	A	R	L	S	Q	Q	Y	D	L	R	V	A	N	V	F	H	A	G	D	G	N	M	H	P	L	I	L	F	D	A	N	E	P	G	E	F	A	R	A	E	E	L	G	G	K	I	L	E	L	C	V	E	V	G	G	S	I	S	G	E	H	G	I	G
Query Conservation
Alig confidence											.																																								.	.	.	.	.
Template Conservation											.																																								.	.	.	.	.
Template Sequence		D	I	A	L	R	R	N	D	T	.	E	W	Y	E	H	L	P	P	E	I	D	S	Q	L	V	H	K	L	Y	Y	G	H	F	M	C	Y	V	F	H	Q	D	Y	I	V	K	K	G	V	D	.	.	.	.	.	V	H	A	L	K	E	Q	M	L	E	L	L	Q	Q	R	G	A	Q	Y	P	A	E	H	N	V	G
Template Known Secondary structure							T	T		S	.			S									T	T										T	T	T	T										T	T			.	.	.	.	.															T	T		B	S		S	S	S			T
Template Predicted Secondary structure											.																																								.	.	.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.						.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	I	N	Q	M	C	A	Q	F	N	S	D	E	I	T	T	F	H	A	V	K	A	A	F	D	P	D	G	L	L	N	P	G	K
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	Y	K	A	P	.	.	.	.	.	.	.	.	.	.	E	T	L	Q	K	F	Y	R	E	N	D	P	T	N	S	M	N	P	G	I
Template Known Secondary structure		T	T	S				.	.	.	.	.	.	.	.	.	.												T	T			B	S	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		533	.	.	.	.	.											.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.