 |
Job Description | P26647 | Confidence | 2.58% | Date | Thu Jan 5 11:43:05 GMT 2012 |
Rank | 25 | Aligned Residues | 41 |
% Identity | 10% | Template | c2q2eB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; |
PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei
|
Resolution | 4.00 Å |
|
  |   |
204 | . | . | . | . | . | 210 | . | . | |
|
|
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | V | S | Q | Y | G | K | D | . |
. |
. |
Q | V | R | E | L | A | A | H | C | R | S | I | M | E | Q | K | I | A | E | L | D | K | E | V | A | E | R | E | A | A | G | K |
Query Conservation |   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | P | F | T | S | E | S | K | D | A | I | A | D | I | P | V | I | K | E | E | I | D | L | A | I | K | E | V | A | R | K | L | K | H | Y | L | S | K | Q | S | N | L | K | K |
Template Known Secondary structure |   |
|
| B | S | S | S | S | S | S | S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|