Job Description P0AAD6 Confidence 1.27% Date Thu Jan 5 11:12:37 GMT 2012 Rank 96 Aligned Residues 98 % Identity 7% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	K	T	D	T	M	W	M	L	G	L	Y	G	T	A	I	G	A	G	V	L	F	L	P	I	N	A	G	V	G	G	M	I	P	L	I	I	M	A	I	L	A	F	P	M	T	F	F	A	H	R	G	L	T	R	F	V	L	S	G	K	N	P	G	E	D	I	T	E	V	V	E	E	H	F	G	I	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L
Template Known Secondary structure			S	S	S					G	G	G																T	T			B																														T	T	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		893	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	I	T	L	L	Y	F	F	A	I	Y	P	I	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions