Job Description P0AAD6 Confidence 99.11% Date Thu Jan 5 11:12:37 GMT 2012 Rank 5 Aligned Residues 396 % Identity 11% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		W	R	K	T	D	T	M	W	M	L	G	L	Y	G	T	A	I	G	A	G	.	V	L	F	L	P	I	N	A	G	V	G	G	M	I	P	L	I	I	M	A	I	L	A	F	P	M	T	F	F	A	H	R	G	L	T	R	F	V	L	S	G	K	N	P	G	E	D	I	T	E	V	V	E	E	H	F	G	I	G
Query Conservation																						.
Alig confidence																						.														.																															.	.
Template Conservation																																				.																															.	.
Template Sequence		V	S	L	P	W	W	A	V	G	A	S	L	I	A	A	N	I	S	A	E	Q	F	I	G	M	S	G	S	G	Y	S	I	G	L	.	A	I	A	S	Y	E	W	M	S	A	I	T	L	I	I	V	G	K	Y	F	L	P	I	F	I	E	K	G	I	Y	.	.	T	I	P	E	F	V	E	K	R	F	N	K	K
Template Known Secondary structure															G	G	G	S	S														T		G	.	G	G	G																T								T	T			.	.	S									T
Template Predicted Secondary structure																																				.																															.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	G	K	L	I	T	L	L	Y	F	F	A	I	Y	P	I	.	L	L	V	Y	S	V	A	I	T	N	T	V	E	S	F	M	S	H	Q	L	G	M	T	P	P	P	R	A	I	L	S	L	I	L	I	V	G	M	M	T	I	V	R	F	G	E	Q	M	I	V	K	A	M	S	I	L	V	F	P	F	V	G	V
Query Conservation																		.
Alig confidence																		.																		.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		L	K	T	I	L	A	V	F	W	I	S	L	Y	I	F	V	N	L	T	S	V	L	Y	L	G	G	L	A	L	E	T	I	L	G	.	.	.	.	.	.	I	P	L	M	Y	S	I	L	G	L	A	L	F	A	L	V	Y	S	I	Y	G	G	V	V	W	T	D	V	I	Q	V	F	F	L	V	L	G	G	F	M
Template Known Secondary structure																	T																			.	.	.	.	.	.																				T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190													.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	L	L	A	L	Y	L	I	P	Q	W	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	A	L	E	T	L	S	L	D	T	A	S	A	T	G	N	G	L	W	M	T	L	W	L	A	I	P	V	M	V	F	S	F	N	H	S	P	I	I	S	S	F	A	V	A	K	R	E	E	Y	G	D	M	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	Y	M	A	V	S	F	I	G	G	T	D	G	W	F	A	G	V	S	K	M	V	D	A	A	P	G	H	F	E	M	I	L	D	Q	S	N	P	Q	Y	M	N	L	P	G	I	A	V	L	I	G	G	L	W	V	A	N	L	Y	Y	W	G	F	N	Q	Y	I	I	Q	R	T	L	A	A	K	S	V	S	E
Template Known Secondary structure												G	G	G														G	G	G	S		S	S			S	S	S	G	G	G	G	T	S		T	T					S	T										T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		E	Q	K	C	S	K	I	L	A	F	A	H	I	M	M	V	L	T	V	M	F	F	V	F	S	C	V	L	S	L	T	P	A	D	L	A	A	.	.	.	.	.	A	K	E	Q	N	I	S	I	L	S	Y	L	A	N	H	F	N	A	P	V	I	A	W	M	A	P	I	I	A	I	I	A	I	T	K	S	F	L
Query Conservation																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.
Template Conservation
Template Sequence		A	Q	K	G	I	V	F	A	A	F	L	A	L	I	V	P	F	L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	G	V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A
Template Known Secondary structure													T	T	T						T											T														S	T	B	G	G	G								T	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		G	H	Y	L	G	A	R	E	G	F	N	G	M	V	.	I	K	S	L	R	G	K	G	K	S	I	E	I	N	K	L	N	R	I	T	A	L	F	M	L	V	T	T	W	I	V	A	T	L	N	P	S	I	L	G	M	I	E	T	L	G	G	P	I	I	A	M	I	L	F	L	M	P	M	Y	A	I	Q	K	V
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	G	G	I	G	Q	C	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F
Template Known Secondary structure															T					T		S																										G	G	G	G	G	G		B											T	T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	M	R	K	Y	S	G	H	I	S	N	V	F	V	V	V	M	G	L	I	A	I	S	A	I	F	Y
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		W	K	K	T	.	.	.	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F
Template Known Secondary structure			T	T		.	.	.
Template Predicted Secondary structure						.	.	.
Template SS confidence
		448	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.