Job Description P0AAD6 Confidence 2.57% Date Thu Jan 5 11:12:37 GMT 2012 Rank 24 Aligned Residues 212 % Identity 10% Template c2f2bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin aqpm; PDBTitle: crystal structure of integral membrane protein aquaporin aqpm at 1.68a2 resolution Resolution 1.68 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.												.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	T	L	W	L	A	I	P	V	M	V	F	S	F	N	H	S	P	I	I	S	S	F	A	V	A	K	R	E	E	Y	G	D	M	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	K	C	S	K	I	L	A	F	A	H	I	M	M	V	L	T	V	M	F	F	V	F	S	C	V	L	S	L	T	P	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	C	I	A	E	F	I	G	T	F	I	L	V	F	F	G	A	G	S	A	A	V	T	L	M	I	A	S	G	G	T	S	P	N	P	F	N	I	G	I	G	L	L	G	G	L	G	D	W	V	A	I	G	L	A	F	G	F	A	I	A	A	S	I	Y	A	L	G	N	I	S	G	C	H	I	N	P	A	V
Template Known Secondary structure																														T	T				S	S	T	T			S	T	T	T	T	T	T																							T	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	A	A	K	E	Q	N	I	S	I	L	S	Y	L	A	N	H	F	N	A	P	V	I	A	W	M	A	P	I	I	A	I	I	A	I	T	K	S	F	L	G	H	Y	L	G	A	R	E	G	F	N	G	M	V	I	K	S	L	R	G	K	G	K	S	I	E	I	N	K	L	N	R	I	T	A	L	F	M
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		T	I	G	L	W	S	V	K	K	F	P	G	R	E	V	V	.	.	.	.	.	.	.	.	P	Y	I	I	A	Q	L	L	G	A	A	F	G	S	F	I	F	L	Q	C	A	G	I	G	A	A	T	V	G	G	L	G	A	T	A	P	F	P	G	I	S	Y	W	Q	A	M	L	A	E	V	V	G	T	F	L	L
Template Known Secondary structure								T	T	S	S		G	G	G			.	.	.	.	.	.	.	.																							T					T	T	G	G	G						T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.																390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	T	T	W	I	V	A	T	L	N	P	S	I	L	G	M	I	E	T	L	G	G	P	I	I	A	M	I	L	F	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	Y	A	I	Q	K	V	P	A	M	R	K	Y	S	G	H	I	S	N	V	F	V	V	V	M	G	L	I	A	I	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																																																																															.
Template Sequence		M	I	T	I	M	G	I	A	V	D	E	R	A	P	K	G	F	A	G	I	I	I	G	L	T	V	A	G	I	I	T	T	L	G	N	I	S	G	S	S	L	N	P	A	R	T	F	G	P	Y	L	N	D	M	I	F	A	G	T	D	L	W	N	Y	Y	S	I	Y	V	I	G	P	I	V	G	A	V	.	L	A
Template Known Secondary structure									T	T	S	T	T	S		T	T																																														G	G	G	T	T												.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.
		422	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	F	Y	S	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	Y	Q	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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