Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EES1
Confidence1.02%DateThu Jan 5 12:33:47 GMT 2012
Rank87Aligned Residues8
% Identity63%Templatec4a0kB_
PDB info PDB header:ligase/dna-binding protein/dnaChain: B: PDB Molecule:e3 ubiquitin-protein ligase rbx1; PDBTitle: structure of ddb1-ddb2-cul4a-rbx1 bound to a 12 bp abasic2 site containing dna-duplex
Resolution5.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.
Predicted Secondary structure 
Query SS confidence 







Query Sequence  KRFDKKHW
Query Conservation 







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Template Conservation   

 



Template Sequence  KRFEVKKW
Template Known Secondary structure 
S


S

Template Predicted Secondary structure 
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   20.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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