Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABD3
Confidence91.74%DateThu Jan 5 11:15:13 GMT 2012
Rank99Aligned Residues143
% Identity11%Templatec3ee4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable ribonucleoside-diphosphate reductase; PDBTitle: r2-like ligand binding mn/fe oxidase from m. tuberculosis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70......
Predicted Secondary structure 












..........
Query SS confidence 





































































. . . . . . . . . .
Query Sequence  VINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGK. . . . . . . . . .
Query Conservation 

  

  
  
  
   
   
          

  
   
 

  

    


  


 
       ..........
Alig confidence 





































































..........
Template Conservation      
  
   
  
   
             
    
  
   
 

   

 

  
                     
Template Sequence  ATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFY
Template Known Secondary structure  TTT
T

S

GGGGTT
Template Predicted Secondary structure 








Template SS confidence 















































































   57..60.........70.........80.........90.........100.........110.........120.........130......
 
   77..80.........90.... .....100.........110.........120.........130.........140.
Predicted Secondary structure  .........





......


Query SS confidence  . . . . . . . . .

















. . . . . .














































Query Sequence  . . . . . . . . . LNIGEDVEEMLRSDLALE. . . . . . LDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLI
Query Conservation  .........          
      
......      
      
    
  
  

  

 

  
   
   
  
Alig confidence  .........

















......














































Template Conservation    
                          



 
 


            
 
    
  
 


  
  

  
   
Template Sequence  AELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRH
Template Known Secondary structure  T







TTTTTT

Template Predicted Secondary structure 









Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   142.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  QKMGLQNY
Query Conservation     
   
Alig confidence 







Template Conservation    
     
Template Sequence  VAADDANW
Template Known Secondary structure 
T
Template Predicted Secondary structure 




Template SS confidence 







   217..220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions