Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABD3
Confidence100.00%DateThu Jan 5 11:15:13 GMT 2012
Rank13Aligned Residues156
% Identity14%Templatec3bvkC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:ferritin; PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70..... ....80
Predicted Secondary structure 














.




Query SS confidence 









































































.




Query Sequence  KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLG. KLNIG
Query Conservation       

  

  
  
  
   
   
          

  
   
 

  

    


  


 
      .     
Alig confidence 









































































.




Template Conservation           

  
  

 

  

  
         
 
  
   
 

  

      
  


      
  
    
Template Sequence  MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKF
Template Known Secondary structure  SS
TT
TT














Template Predicted Secondary structure 























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140... ......150.......
Predicted Secondary structure 




...


Query SS confidence 






























































. . .













Query Sequence  EDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQK. . . MGLQNYLQAQIREE
Query Conservation        
      
      
      
    
  
  

  

 

  
   
   
  
  ... 
   

       
Alig confidence 






























































...













Template Conservation        
  

  
         
   
    
  
  


 

 

 
    
   
  
      
    
 
  
  
Template Sequence  EGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG
Template Known Secondary structure  S
TT
T
STTT
Template Predicted Secondary structure 








Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions