Job Description P0ABD3 Confidence 99.91% Date Thu Jan 5 11:15:13 GMT 2012 Rank 61 Aligned Residues 140 % Identity 12% Template c2z90D_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		M	K	G	D	T	K	V	I	N	Y	L	N	K	L	L	G	N	E	L	V	A	I	N	Q	Y	F	L	H	A	R	M	F	K	N	W	G	L	K	R	L	N	D	V	E	Y	H	E	S	I	D	E	M	K	H	A	D	R	Y	I	E	R	I	L	F	L	E	G	L	P	N	L	Q	D	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	A	T	P	E	F	G	G	N	L	Q	K	V	L	V	D	L	I	E	L	S	L	Q	G	K	Q	A	H	W	N	V	V	G	S	N	F	R	D	L	H	L	Q	L	D	E	L	V	D	F	A	R	E	G	S	D	T	I	A	E	R	M	R	A	L	D	A	V	P	D	G	R	S	D	T	V	A	A	T	T
Template Known Secondary structure																																			S	T	T																													T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
					75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	K	L	N	I	G	E	D	V	E	E	M	L	R	S	D	L	A	L	E	L	D	G	A	K	N	L	R	E	A	I	G	Y	A	D	S	V	H	D	Y	V	S	R	D	M	M	I	E	I	L	R	D	E	E	G	H	I	D	W	L	E	T	E	L	D	L	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																					.
Template Conservation																																									.
Template Sequence		T	L	P	E	F	P	A	F	E	R	S	T	A	D	V	V	D	L	I	T	T	R	I	N	A	T	V	D	T	I	R	R	V	H	D	A	V	D	A	.	E	D	P	S	T	A	D	L	L	H	G	L	I	D	G	L	E	K	Q	A	W	L	I	R	S	E	N	R	K	V
Template Known Secondary structure			S						S																																.																									G	G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions