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Job Description | P0ABD3 | Confidence | 99.93% | Date | Thu Jan 5 11:15:13 GMT 2012 |
Rank | 46 | Aligned Residues | 136 |
% Identity | 13% | Template | c1yuzB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:nigerythrin; |
PDBTitle: partially reduced state of nigerythrin
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Resolution | 1.40 Å |
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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | I | N | Y | L | N | K | L | L | G | N | E | L | V | A | I | N | Q | Y | F | L | H | A | R | M | F | K | N | W | G | L | K | R | L | N | D | V | E | Y | H | E | S | I | D | E | M | K | H | A | D | R | Y | I | E | R | I | L | F | L | E | G | L | P | N | L | Q | D | L | G | K | L | N | I | G | E | D | V | E | E | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | L | E | N | L | K | A | A | I | A | G | E | T | G | A | H | A | K | Y | T | A | F | A | K | A | A | R | E | Q | G | Y | E | Q | I | A | R | L | F | E | A | T | A | A | A | E | L | I | H | I | G | L | E | Y | A | L | V | A | E | M | E | P | G | Y | E | K | P | T | V | A | A | P | S | . |
A | Y | S | C | D | L | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
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87 | . | . | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | R | S | D | L | A | L | E | . |
L | D | G | A | K | N | L | R | E | A | I | G | Y | A | D | S | V | H | D | Y | V | S | R | D | M | M | I | E | I | L | R | D | E | E | G | H | I | D | W | L | E | T | E | L | D | L | I | Q | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | I | S | G | A | N | G | E | I | Y | E | T | S | D | M | Y | P | A | F | I | R | K | A | Q | E | E | G | N | S | K | A | V | H | V | F | T | R | A | K | L | A | E | S | V | H | A | E | R | Y | L | A | A | Y | N | D | I | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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