Job Description P0AAV4 Confidence 100.00% Date Thu Jan 5 11:13:55 GMT 2012 Rank 2 Aligned Residues 192 % Identity 38% Template c3oepA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative uncharacterized protein ttha0988; PDBTitle: crystal structure of ttha0988 in space group p43212 Resolution 1.75 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	A	V	V	L	E	L	E	P	P	V	T	L	A	S	Q	K	R	I	W	R	L	A	Q	R	L	V	D	.	.	M	P	N	V	V	E	A	I	P	G	M	N	N	I	T	V	I	L	R	N	P	E	S	L	A	L	D	A	I	E	R	L	Q	R	W	W	E	E	S	E	A	L	E	P	E	S	R	F	I	E
Query Conservation																														.	.
Alig confidence																														.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	F	Y	L	R	F	G	E	G	V	S	E	E	A	N	R	R	A	L	A	L	A	E	A	L	L	R	A	P	P	P	G	L	L	D	A	V	P	A	Y	G	V	L	Y	L	E	Y	D	P	R	R	L	S	R	G	R	L	L	R	L	L	K	G	.	.	.	.	.	.	.	.	.	.	L	P	R	V	V	E
Template Known Secondary structure										S	S	S																		S			T	T								T	T								T	T	T	S												.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.											.	.	.	70	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	V	Y	G	G	A	G	G	P	D	L	A	V	V	A	A	H	C	G	L	S	E	K	Q	V	V	E	L	H	S	S	V	E	Y	V	V	W	F	L	G	F	Q	P	G	F	P	Y	L	G	S	L	P	E	Q	L	H	T	P	R	R	A	E	P	R	L	L	V	P	A	G	S	V	G	I	G	G	P	Q
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		I	P	V	R	Y	D	.	.	.	G	E	D	L	P	E	V	A	S	R	L	G	L	S	L	E	A	V	K	A	L	H	Q	K	P	L	Y	R	V	Y	A	L	G	F	T	P	G	F	P	F	L	A	E	V	E	P	A	L	R	L	P	R	K	P	H	P	R	P	R	V	P	A	H	A	V	A	V	A	G	V	Q
Template Known Secondary structure								.	.	.		T	T									T												S	S									S	S	T	T									G	G	G						S	S							T	T						T	T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	Y	P	L	A	T	P	G	G	W	Q	L	I	G	H	T	S	L	S	L	F	D	P	A	R	D	E	P	I	L	L	R	P	G	D	S	V	R	F	V	P	Q	K	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	I	Y	P	L	P	S	P	G	G	W	N	L	L	G	T	S	L	V	A	V	Y	D	P	H	R	E	T	P	F	L	L	R	P	G	D	R	V	R	F	L	E	A	E	G	P
Template Known Secondary structure						S	S						S							S	S		S	B		T	T	S	S	S		B	S			T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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