Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAV4
Confidence16.92%DateThu Jan 5 11:13:55 GMT 2012
Rank86Aligned Residues33
% Identity21%Templatec3jt0B_
PDB info PDB header:structural proteinChain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.
Predicted Secondary structure 

















Query SS confidence 
































Query Sequence  GGWQLIGHTSLSLFDPARDEPILLRPGDSVRFV
Query Conservation 


 





  


     
 

  

 


 
Alig confidence 
































Template Conservation   

 
          
 

    
 

  



Template Sequence  GGWEXIRKIGDTSVSYKYTSRYVLKAGQTVTIW
Template Known Secondary structure  TT
TT

TT

TT
Template Predicted Secondary structure 














Template SS confidence 
































   53......60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions