Job Description P0AAV4 Confidence 26.16% Date Thu Jan 5 11:13:55 GMT 2012 Rank 61 Aligned Residues 78 % Identity 12% Template c3h25A_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein b; PDBTitle: crystal structure of the catalytic domain of primase repb' in complex2 with initiator dna Resolution 2.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		G	E	T	A	V	V	L	E	L	E	P	P	V	T	L	A	S	Q	K	R	I	W	R	L	A	Q	R	L	V	D	M	P	N	V	V	E	A	I	P	G	M	N	N	I	T	V	I	L	R	N	P	E	S	L	A	.	.	L	D	A	I	E	R	L	Q	R	W	W	E	E	S	E	A	L	E	P	E	S	R	F
Query Conservation																																																									.	.
Alig confidence													.	.	.	.																																									.	.
Template Conservation													.	.	.	.
Template Sequence		Q	E	R	H	G	L	V	L	V	D	D	.	.	.	.	L	S	E	F	D	L	D	D	M	K	A	E	G	R	E	P	A	L	V	V	E	T	S	P	K	N	Y	Q	A	W	V	K	V	A	D	A	A	G	G	E	L	R	G	Q	I	A	R	T	L	A	S	E	Y	D	A	D	P	A	S	A	D	S	R	H	Y
Template Known Secondary structure		T											.	.	.	.												T	T				S							T	T										S																		T	T			G	G	G		S	T	T
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		88	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	L	A
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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