Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAV4
Confidence73.25%DateThu Jan 5 11:13:55 GMT 2012
Rank15Aligned Residues76
% Identity22%Templatec3bqhA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb; PDBTitle: structure of the central domain (msra) of neisseria meningitidis pilb2 (oxidized form)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.. .......60.........70.........80.... ..
Predicted Secondary structure 








.....................














...

Query SS confidence 





















. . . . . . . . . . . . . . . . . . . . .































. . .

Query Sequence  WRLAQRLVDMPNVVEAIPGMNN. . . . . . . . . . . . . . . . . . . . . ITVILRNPESLALDAIERLQRWWEESEALEPE. . . SR
Query Conservation   

   
    

 
 

   
.....................


 

            
             ... 
Alig confidence 





















.....................































...

Template Conservation 

 
  
    

  
 





    


  
  
 


 
 
 
 


  

   

  
   



    

 
 
 
Template Sequence  WGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPTSLNKQGNDTGT
Template Known Secondary structure  TSTTS
SSSS

S



TTT

S

BGGGSSS

TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   209210.........220.........230.........240.........250.........260.........270.........280........
 
   87..90.........100.........
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  FIEIPVVYGGAGGPDLAVVAAHC
Query Conservation     


 
  
 



  

   
Alig confidence 










...








Template Conservation 



 
     ... 
   
   
Template Sequence  QYRSGVYYTDP. . . AEKAVIAAA
Template Known Secondary structure  TT
SS...
Template Predicted Secondary structure 


...
Template SS confidence 






















   289290......... 300........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions