Job Description P0AAV4 Confidence 51.43% Date Thu Jan 5 11:13:55 GMT 2012 Rank 39 Aligned Residues 57 % Identity 25% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		V	W	F	L	G	F	Q	P	G	F	P	Y	L	G	S	L	P	E	Q	L	H	T	P	R	R	A	E	P	R	L	L	V	P	A	G	S	V	G	I	G	G	P	Q	T	G	V	Y	P	L	A	T	P	G	G	W	Q	L	I	G	H	T	S	L	S	L	F	D	P	A	R	.	D	E	P	I	L	L	R	P	G
Query Conservation																																																																								.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	P	A	G	Y	A	D	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	H	A	Q	G	K	F	S	V	T	I	D	G	L	D	.	.	.	.	.	.	.	.	.	.	.	Y	P	Q	V	G	R	V	C	M	D	Q	F	V	I	S	L	G	D	N	P	H	G	V	E	A	G
Template Known Secondary structure				S			G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T	T	T						T	T			.	.	.	.	.	.	.	.	.	.	.					S				S	S								T		T	T				T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.																		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.												.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		206	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	V	R	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	V	I	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions